RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 CCDC85CA6NKD9 419 aa6.07□□□□□ -1.44
RBM39-228ENST00000471635 E9PSI1 815 aa6.07□□□□□ -1.44
RBM39-228ENST00000471635 U2SURPO15042 1029 aaKnown RBP6.07□□□□□ -1.44
RBM39-228ENST00000471635 NKRFO15226 690 aaKnown RBP eCLIP6.07□□□□□ -1.44
RBM39-228ENST00000471635 SOD2P04179 222 aa6.07□□□□□ -1.44
RBM39-228ENST00000471635 ZC3H6P61129 1189 aaKnown RBP6.07□□□□□ -1.44
RBM39-228ENST00000471635 SPIRE1Q08AE8 756 aa6.07□□□□□ -1.44
RBM39-228ENST00000471635 NAALADL2Q58DX5 795 aa6.07□□□□□ -1.44
RBM39-228ENST00000471635 STYK1Q6J9G0 422 aa6.07□□□□□ -1.44
RBM39-228ENST00000471635 SPATC1Q76KD6 591 aa6.07□□□□□ -1.44
RBM39-228ENST00000471635 UHMK1Q8TAS1 419 aaKnown RBP6.07□□□□□ -1.44
RBM39-228ENST00000471635 KISS1RQ969F8 398 aaPredicted RBP6.07□□□□□ -1.44
RBM39-228ENST00000471635 SPATA9Q9BWV2 254 aa6.07□□□□□ -1.44
RBM39-228ENST00000471635 FTSJ1Q9UET6 329 aa6.07□□□□□ -1.44
RBM39-228ENST00000471635 LAMTOR5O43504 91 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 FAHP16930 419 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 PAN2Q504Q3 1202 aaKnown RBP6.06□□□□□ -1.44
RBM39-228ENST00000471635 GLB1LQ6UWU2 654 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 LIMS2Q7Z4I7 341 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.06□□□□□ -1.44
RBM39-228ENST00000471635 MBD6Q96DN6 1003 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 IPPKQ9H8X2 491 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 DLL4Q9NR61 685 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 DSEQ9UL01 958 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 TSC22D4Q9Y3Q8 395 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 TRAF6Q9Y4K3 522 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 TELO2Q9Y4R8 837 aa6.06□□□□□ -1.44
RBM39-228ENST00000471635 FAM47E-STBD1D6RA91 191 aa6.05□□□□□ -1.44
RBM39-228ENST00000471635 PDPK1O15530 556 aa6.05□□□□□ -1.44
RBM39-228ENST00000471635 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.05□□□□□ -1.44
RBM39-228ENST00000471635 PLEKHH3Q7Z736 793 aa6.05□□□□□ -1.44
RBM39-228ENST00000471635 DTX3Q8N9I9 347 aa6.05□□□□□ -1.44
RBM39-228ENST00000471635 ALG1Q9BT22 464 aa6.05□□□□□ -1.44
RBM39-228ENST00000471635 HSPBP1Q9NZL4 362 aa6.05□□□□□ -1.44
RBM39-228ENST00000471635 PFDN2Q9UHV9 154 aa6.05□□□□□ -1.44
RBM39-228ENST00000471635 ZDHHC9Q9Y397 364 aa6.05□□□□□ -1.44
RBM39-228ENST00000471635 MSRB2Q9Y3D2 182 aa6.05□□□□□ -1.44
RBM39-228ENST00000471635 NUB1Q9Y5A7 615 aa6.05□□□□□ -1.44
RBM39-228ENST00000471635 FBXO21O94952 628 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 CKMP06732 381 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 TGM1P22735 817 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 GLRBP48167 497 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 SURF1Q15526 300 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 SKIDA1Q1XH10 827 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 MTERF2Q49AM1 385 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 DPH6Q7L8W6 267 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 MTDHQ86UE4 582 aaKnown RBP6.04□□□□□ -1.44
RBM39-228ENST00000471635 KBTBD2Q8IY47 623 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 NUDT10Q8NFP7 164 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 IGDCC4Q8TDY8 1250 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 ZNF669Q96BR6 464 aaPredicted RBP6.04□□□□□ -1.44
RBM39-228ENST00000471635 NUDT11Q96G61 164 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 CDC6Q99741 560 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 SSBP3Q9BWW4 388 aaPredicted RBP6.04□□□□□ -1.44
RBM39-228ENST00000471635 CD244Q9BZW8 370 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 TANGO6Q9C0B7 1094 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 VPS11Q9H270 941 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 PPP4R1LQ9P1A2 415 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 ST6GALNAC2Q9UJ37 374 aa6.04□□□□□ -1.44
RBM39-228ENST00000471635 ADCY3O60266 1144 aa6.03□□□□□ -1.44
RBM39-228ENST00000471635 COL6A1P12109 1028 aa6.03□□□□□ -1.44
RBM39-228ENST00000471635 SSRP1Q08945 709 aaKnown RBP6.03□□□□□ -1.44
RBM39-228ENST00000471635 NFATC3Q12968 1075 aa6.03□□□□□ -1.44
RBM39-228ENST00000471635 RASGRF1Q13972 1273 aa6.03□□□□□ -1.44
RBM39-228ENST00000471635 SMAD2Q15796 467 aaKnown RBP6.03□□□□□ -1.44
RBM39-228ENST00000471635 HABP4Q5JVS0 413 aaKnown RBP6.03□□□□□ -1.44
RBM39-228ENST00000471635 CD276Q5ZPR3 534 aa6.03□□□□□ -1.44
RBM39-228ENST00000471635 KCTD1Q719H9 257 aa6.03□□□□□ -1.44
RBM39-228ENST00000471635 KLHL36Q8N4N3 616 aa6.03□□□□□ -1.44
RBM39-228ENST00000471635 BARX1Q9HBU1 254 aaPredicted RBP6.03□□□□□ -1.44
RBM39-228ENST00000471635 JADE2Q9NQC1 790 aa6.03□□□□□ -1.44
RBM39-228ENST00000471635 ZFP69BQ9UJL9 534 aa6.03□□□□□ -1.44
RBM39-228ENST00000471635 TRBV23-1A0A0A0MS06 115 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 B4GALT4O60513 344 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 ENO2P09104 434 aaPredicted RBP6.02□□□□□ -1.45
RBM39-228ENST00000471635 ATP2B1P20020 1258 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 PFKPQ01813 784 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 FAM209AQ5JX71 171 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 FOXB2Q5VYV0 432 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 PKN3Q6P5Z2 889 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 ARHGEF18Q6ZSZ5 1173 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 STPG3Q8N7X2 389 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 ZNF747Q9BV97 191 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 ARHGAP20Q9P2F6 1191 aa6.02□□□□□ -1.45
RBM39-228ENST00000471635 TCRBV5S4A2TA0A5A2 114 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 NPEPPSL1A6NEC2 478 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 ACOT7O00154 380 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 AQP7O14520 342 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 DIAPH1O60610 1272 aaKnown RBP6.01□□□□□ -1.45
RBM39-228ENST00000471635 KLHL18O94889 574 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 EPHA5P54756 1037 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 PPP2CBP62714 309 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 PPP2CAP67775 309 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 PAK1Q13153 545 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 MAMDC2Q7Z304 686 aaPredicted RBP6.01□□□□□ -1.45
RBM39-228ENST00000471635 SCUBE1Q8IWY4 988 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 SH3RF2Q8TEC5 729 aa6.01□□□□□ -1.45
RBM39-228ENST00000471635 IPO9Q96P70 1041 aaKnown RBP6.01□□□□□ -1.45
RBM39-228ENST00000471635 CDK5RAP1Q96SZ6 601 aaKnown RBP6.01□□□□□ -1.45
RBM39-228ENST00000471635 PCDHA8Q9Y5H6 950 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms