RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 LGI4Q8N135 537 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 GSTCDQ8NEC7 633 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 PCDH19Q8TAB3 1148 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 MKL1Q969V6 931 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 LCORQ96JN0 433 aaPredicted RBP4.95□□□□□ -1.62
COPS3-206ENST00000471414 KCNJ15Q99712 375 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 ALG1Q9BT22 464 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 SNTG2Q9NY99 539 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 PFDN2Q9UHV9 154 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 INVSQ9Y283 1065 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 NUB1Q9Y5A7 615 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 K7ESM1 405 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 KNG1P01042 644 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 AMY2AP04746 511 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 AMY2BP19961 511 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 GABREP78334 506 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 GRIN1Q05586 938 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 PAK1Q13153 545 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 TRIM61Q5EBN2 209 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 ZC3H12BQ5HYM0 836 aaKnown RBP4.94□□□□□ -1.62
COPS3-206ENST00000471414 PRAMEF18Q5VWM3 479 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 VASNQ6EMK4 673 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 BORAQ6PGQ7 559 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 TTC9BQ8N6N2 239 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 DEPDC7Q96QD5 511 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 DHRS4Q9BTZ2 278 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 KCND1Q9NSA2 647 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 SRPK3Q9UPE1 567 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 JAG2Q9Y219 1238 aa4.94□□□□□ -1.62
COPS3-206ENST00000471414 MRPS23Q9Y3D9 190 aaKnown RBP4.94□□□□□ -1.62
COPS3-206ENST00000471414 ZNF839A8K0R7 811 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 ZNF561-AS1K7EIQ3 104 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 IL18BPO95998 194 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 CKMP06732 381 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 GTF2F1P35269 517 aaKnown RBP eCLIP4.93□□□□□ -1.62
COPS3-206ENST00000471414 FAM124AQ86V42 546 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 KLHL36Q8N4N3 616 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 NUDT10Q8NFP7 164 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 NUDT11Q96G61 164 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 C1QTNF3Q9BXJ4 246 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 L2HGDHQ9H9P8 463 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 ADAM29Q9UKF5 820 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 PCDHA8Q9Y5H6 950 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 KDM2BQ8NHM5 1336 aa4.93□□□□□ -1.62
COPS3-206ENST00000471414 MAN2B1O00754 1011 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 KCNQ2O43526 872 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 MAGEA10P43363 369 aaPredicted RBP4.92□□□□□ -1.62
COPS3-206ENST00000471414 EPHB4P54760 987 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 PFKPQ01813 784 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 GPR19Q15760 415 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 SKIDA1Q1XH10 827 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 FIGNQ5HY92 759 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 C16orf59Q7L2K0 433 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 SAMD11Q96NU1 681 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 CDC6Q99741 560 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 CD244Q9BZW8 370 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 TMEM168Q9H0V1 697 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 CROTQ9UKG9 612 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 CBLCQ9ULV8 474 aa4.92□□□□□ -1.62
COPS3-206ENST00000471414 CCDC85CA6NKD9 419 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 FAM90A27PA6NNH2 459 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 LAMTOR5O43504 91 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 ENO2P09104 434 aaPredicted RBP4.91□□□□□ -1.62
COPS3-206ENST00000471414 PDE6AP16499 860 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 PTPN1P18031 435 aaKnown RBP4.91□□□□□ -1.62
COPS3-206ENST00000471414 NAT1P18440 290 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 LACTBP83111 547 aaPredicted RBP4.91□□□□□ -1.62
COPS3-206ENST00000471414 DBPQ10586 325 aaPredicted RBP4.91□□□□□ -1.62
COPS3-206ENST00000471414 NFATC3Q12968 1075 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 SURF1Q15526 300 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 SMAD2Q15796 467 aaKnown RBP4.91□□□□□ -1.62
COPS3-206ENST00000471414 ARHGAP36Q6ZRI8 547 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 Q6ZUG5 572 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 MTDHQ86UE4 582 aaKnown RBP4.91□□□□□ -1.62
COPS3-206ENST00000471414 NLGN4XQ8N0W4 816 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 DNERQ8NFT8 737 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 IGDCC4Q8TDY8 1250 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 FBXW5Q969U6 566 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 AJUBAQ96IF1 538 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 KATNBL1Q9H079 304 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 MEGF9Q9H1U4 602 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 SMURF1Q9HCE7 757 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 PPP4R1LQ9P1A2 415 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 FTSJ1Q9UET6 329 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 ZFP69BQ9UJL9 534 aa4.91□□□□□ -1.62
COPS3-206ENST00000471414 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.9□□□□□ -1.63
COPS3-206ENST00000471414 C1QTNF3-AMACRE9PGA6 284 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 C4BPAP04003 597 aaKnown RBP4.9□□□□□ -1.63
COPS3-206ENST00000471414 CYP1A1P04798 512 aaPredicted RBP4.9□□□□□ -1.63
COPS3-206ENST00000471414 PYGMP11217 842 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 ADAM17P78536 824 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 SF3A1Q15459 793 aaKnown RBP4.9□□□□□ -1.63
COPS3-206ENST00000471414 PHF19Q5T6S3 580 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 SOGA3Q5TF21 947 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 TRMT10BQ6PF06 316 aaKnown RBP4.9□□□□□ -1.63
COPS3-206ENST00000471414 DBX2Q6ZNG2 339 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 PLEKHH3Q7Z736 793 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 GGNQ86UU5 652 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 KBTBD2Q8IY47 623 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms