RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 JAK3P52333 1124 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 SLC12A3P55017 1021 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 ERVK-9P63128 1117 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 ERVK-24P63145 666 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 KRT76Q01546 638 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 PAK1Q13153 545 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 DHX8Q14562 1220 aaKnown RBP10.47□□□□□ -0.73
VPS52-216ENST00000471309 GNPTABQ3T906 1256 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 HS1BP3Q53T59 392 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 CST9Q5W186 159 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 GPBP1Q86WP2 473 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 TRMT44Q8IYL2 757 aaKnown RBP10.47□□□□□ -0.73
VPS52-216ENST00000471309 FAM133AQ8N9E0 248 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 SYT2Q8N9I0 419 aaPredicted RBP10.47□□□□□ -0.73
VPS52-216ENST00000471309 RDM1Q8NG50 284 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 SMCR8Q8TEV9 937 aaPredicted RBP10.47□□□□□ -0.73
VPS52-216ENST00000471309 ZNF526Q8TF50 670 aaPredicted RBP10.47□□□□□ -0.73
VPS52-216ENST00000471309 BRI3BPQ8WY22 251 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 DDX12PQ92771 950 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 DNAJC19Q96DA6 116 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 TRIM44Q96DX7 344 aaPredicted RBP10.47□□□□□ -0.73
VPS52-216ENST00000471309 DYDC2Q96IM9 177 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 TCEAL9Q9UHQ7 104 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 CTNND2Q9UQB3 1225 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 NFE2L3Q9Y4A8 694 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 NFASCO94856 1347 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 LOC102724159A0A0B4J2E5 919 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 FRMD3A2A2Y4 597 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 WDR64B1ANS9 1081 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 B4DLN1 442 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 SPATA31C2B4DYI2 1134 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 DDX39AO00148 427 aaKnown RBP10.46□□□□□ -0.73
VPS52-216ENST00000471309 PSMA7O14818 248 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.73
VPS52-216ENST00000471309 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.73
VPS52-216ENST00000471309 CYP2C8P10632 490 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 KCNA2P16389 499 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 ZNF18P17022 549 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 ICAM3P32942 547 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 PRCPP42785 496 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 CCNA1P78396 465 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 CNTN2Q02246 1040 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 PSMD2Q13200 908 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 KCTD2Q14681 263 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 PWP2Q15269 919 aaKnown RBP10.46□□□□□ -0.73
VPS52-216ENST00000471309 STXBP2Q15833 593 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 CDKAL1Q5VV42 579 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 SPATA1Q5VX52 437 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 ZNF746Q6NUN9 644 aaPredicted RBP10.46□□□□□ -0.73
VPS52-216ENST00000471309 DYMQ7RTS9 669 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 MIER3Q7Z3K6 550 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 DHTKD1Q96HY7 919 aaPredicted RBP10.46□□□□□ -0.73
VPS52-216ENST00000471309 PARK7Q99497 189 aaKnown RBP10.46□□□□□ -0.73
VPS52-216ENST00000471309 MPHOSPH6Q99547 160 aaKnown RBP10.46□□□□□ -0.73
VPS52-216ENST00000471309 SENP7Q9BQF6 1050 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 LXNQ9BS40 222 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 FANCLQ9NW38 375 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 RGL1Q9NZL6 768 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 KCND2Q9NZV8 630 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 PKD2L1Q9P0L9 805 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 MORF4L1Q9UBU8 362 aa10.46□□□□□ -0.73
VPS52-216ENST00000471309 KIAA1217Q5T5P2 1943 aa10.46□□□□□ -0.74
VPS52-216ENST00000471309 PASKQ96RG2 1323 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 DNAJC25-GNG10A0A024R161 153 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 SOWAHBA6NEL2 793 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 GOLGA6L6A8MZA4 724 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 ATP9AO75110 1047 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 LYPLA2O95372 231 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 ATP1A3P13637 1013 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 HUNKP57058 714 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 PSMC6P62333 389 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 CTTNQ14247 550 aaKnown RBP10.45□□□□□ -0.74
VPS52-216ENST00000471309 KLHL10Q6JEL2 608 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 RASAL3Q86YV0 1011 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 TPH2Q8IWU9 490 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 CCDC65Q8IXS2 484 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 SMAP1Q8IYB5 467 aaPredicted RBP10.45□□□□□ -0.74
VPS52-216ENST00000471309 KIAA0895Q8NCT3 520 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 GPRC5AQ8NFJ5 357 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 NELFBQ8WX92 580 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 NACC1Q96RE7 527 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 MMP19Q99542 508 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 BHMT2Q9H2M3 363 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 ZSWIM4Q9H7M6 989 aa10.45□□□□□ -0.74
VPS52-216ENST00000471309 ZCCHC17Q9NP64 241 aaKnown RBP10.45□□□□□ -0.74
VPS52-216ENST00000471309 ARID2Q68CP9 1835 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 BICDL2A1A5D9 508 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 CBFA2T2O43439 604 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 CCNE2O96020 404 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 KRT18P05783 430 aaKnown RBP10.44□□□□□ -0.74
VPS52-216ENST00000471309 P4HBP07237 508 aaKnown RBP10.44□□□□□ -0.74
VPS52-216ENST00000471309 FCER1AP12319 257 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 IDEP14735 1019 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 QARSP47897 775 aaKnown RBP10.44□□□□□ -0.74
VPS52-216ENST00000471309 FANCCQ00597 558 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 SPAG1Q07617 926 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 STK4Q13043 487 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 COASYQ13057 564 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 MKRN3Q13064 507 aaKnown RBP10.44□□□□□ -0.74
VPS52-216ENST00000471309 Q3C1V9 767 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms