RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 GINM1Q9NU53 330 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 DNAJB12Q9NXW2 375 aaKnown RBP6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 RTEL1Q9NZ71 1219 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 CNTN3Q9P232 1028 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 ARFGEF1Q9Y6D6 1849 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 CNTNAP1P78357 1384 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 ECM29Q5VYK3 1845 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 BTBD18B2RXH4 712 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 SHISA8B8ZZ34 492 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 hCG_1984214I3L0E3 225 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 ARHGEF15O94989 841 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 PDHBP11177 359 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 EEF2P13639 858 aaKnown RBP6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 ADH7P40394 386 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 NLRP5P59047 1200 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 PLAURQ03405 335 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 ICA1Q05084 483 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 ZNF543Q08ER8 600 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 NBPF9Q3BBW0 867 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 RILPL1Q5EBL4 403 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 FAM173BQ6P4H8 233 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 NOSTRINQ8IVI9 506 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 DIS3L2Q8IYB7 885 aaKnown RBP6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 ZNF713Q8N859 430 aaPredicted RBP6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 C1orf127Q8N9H9 656 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 GMCL1P1Q8NEA9 526 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 CCDC148Q8NFR7 591 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 OR13H1Q8NG92 308 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 GPT2Q8TD30 523 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 TRPM4Q8TD43 1214 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 KCNG4Q8TDN1 519 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 CCDC12Q8WUD4 166 aaPredicted RBP6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 DCAF4Q8WV16 495 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 PMEPA1Q969W9 287 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 CHAMP1Q96JM3 812 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 USP28Q96RU2 1077 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 FAM129BQ96TA1 746 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 GPRC5DQ9NZD1 345 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 SEC63Q9UGP8 760 aaKnown RBP6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 PGAP2Q9UHJ9 254 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 ISY1Q9ULR0 285 aaKnown RBP6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 ZNF541Q9H0D2 1346 aa6.97□□□□□ -1.29
SMNDC1-204ENST00000471297 ADAMTSL1Q8N6G6 1762 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 KIF28PB7ZC32 967 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 PPP6R2O75170 966 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 GADD45BO75293 160 aaPredicted RBP6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 TNFRSF21O75509 655 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 BMP15O95972 392 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 GH2P01242 217 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 CAP2P40123 477 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 NASPP49321 788 aaPredicted RBP6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 ATP2B2Q01814 1243 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 MLLT1Q03111 559 aaPredicted RBP6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 RASA3Q14644 834 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 SEPT2Q15019 361 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 STK38Q15208 465 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 SF3A1Q15459 793 aaKnown RBP6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 TBC1D10BQ4KMP7 808 aaPredicted RBP6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 ANO1Q5XXA6 986 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 DCAF15Q66K64 600 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 SLFN13Q68D06 897 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 CAVIN1Q6NZI2 390 aaKnown RBP6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 HFE2Q6ZVN8 426 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 ILDR2Q71H61 639 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 APOBEC3FQ8IUX4 373 aaKnown RBP6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 JMYQ8N9B5 988 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 DAGLBQ8NCG7 672 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 LINC00301Q8NCQ3 95 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 NIF3L1Q9GZT8 377 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 SH2D4AQ9H788 454 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 GJB4Q9NTQ9 266 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 RNF181Q9P0P0 153 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 VPS54Q9P1Q0 977 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 HACL1Q9UJ83 578 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 NOL7Q9UMY1 257 aaKnown RBP6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 KCNJ14Q9UNX9 436 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 CEP131Q9UPN4 1083 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 PPP2R3BQ9Y5P8 575 aa6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 MORC2Q9Y6X9 1032 aaPredicted RBP6.96□□□□□ -1.3
SMNDC1-204ENST00000471297 A0A1W2PQ27 194 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 A0A1W2PQ64 194 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 A0A1W2PQD8 194 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 SHTN1A0MZ66 631 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 F5H6K3 240 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 UBE2Q2LH0YL09 131 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 J3QW42 95 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 SPTLC2O15270 562 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 CYTH3O43739 400 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 GRIN3BO60391 1043 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 CTNND1O60716 968 aaKnown RBP6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 GDF11O95390 407 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 IGHA2P01877 340 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 ASNSP08243 561 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 GOLGA8HP0CJ92 632 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 AMPD1P23109 780 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 CES1P23141 567 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 GNA11P29992 359 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 SOX18P35713 384 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 SLC1A4P43007 532 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 TRAPPC10P48553 1259 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms