RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	PSMD2	Q13200	908 aa		28.94	■■■□□ 2.22
U2AF1-208	ENST00000471250	CCL15	Q16663	113 aa		28.94	■■■□□ 2.22
U2AF1-208	ENST00000471250	SPRYD7	Q5W111	196 aa		28.94	■■■□□ 2.22
U2AF1-208	ENST00000471250	CST9	Q5W186	159 aa		28.94	■■■□□ 2.22
U2AF1-208	ENST00000471250	TPH2	Q8IWU9	490 aa		28.94	■■■□□ 2.22
U2AF1-208	ENST00000471250	ZNF526	Q8TF50	670 aa	Predicted RBP	28.94	■■■□□ 2.22
U2AF1-208	ENST00000471250	IFNK	Q9P0W0	207 aa		28.94	■■■□□ 2.22
U2AF1-208	ENST00000471250	MAPK8IP1	Q9UQF2	711 aa		28.94	■■■□□ 2.22
U2AF1-208	ENST00000471250	TRPM7	Q96QT4	1865 aa		28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	ATP9A	O75110	1047 aa		28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	FCER1A	P12319	257 aa		28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	IDE	P14735	1019 aa		28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	ARSH	Q5FYA8	562 aa		28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	DHTKD1	Q96HY7	919 aa	Predicted RBP	28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	BTBD19	C9JJ37	291 aa		28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	RGS20	O76081	388 aa		28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	ZBTB48	P10074	688 aa	Predicted RBP	28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	ANKRD23	Q86SG2	305 aa		28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	SPC24	Q8NBT2	197 aa		28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	BRI3BP	Q8WY22	251 aa		28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	XPO4	Q9C0E2	1151 aa	Known RBP	28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	SAMSN1	Q9NSI8	373 aa	Known RBP	28.93	■■■□□ 2.22
U2AF1-208	ENST00000471250	KIAA1217	Q5T5P2	1943 aa		28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	ASTN1	O14525	1302 aa		28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	GOLGA6L6	A8MZA4	724 aa		28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	POTEB2	H3BUK9	544 aa		28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	PDHX	O00330	501 aa		28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	PSMA7	O14818	248 aa		28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	ALDH5A1	P51649	535 aa	Predicted RBP	28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	MKRN3	Q13064	507 aa	Known RBP	28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	KIAA0895	Q8NCT3	520 aa		28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	CDHR1	Q96JP9	859 aa		28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	PANK4	Q9NVE7	773 aa		28.92	■■■□□ 2.22
U2AF1-208	ENST00000471250	COASY	Q13057	564 aa		28.91	■■■□□ 2.22
U2AF1-208	ENST00000471250	STXBP2	Q15833	593 aa		28.91	■■■□□ 2.22
U2AF1-208	ENST00000471250	CCDC65	Q8IXS2	484 aa		28.91	■■■□□ 2.22
U2AF1-208	ENST00000471250	DRC7	Q8IY82	874 aa		28.91	■■■□□ 2.22
U2AF1-208	ENST00000471250	FAM133A	Q8N9E0	248 aa		28.91	■■■□□ 2.22
U2AF1-208	ENST00000471250	NACC1	Q96RE7	527 aa		28.91	■■■□□ 2.22
U2AF1-208	ENST00000471250	SERPINC1	P01008	464 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	P4HB	P07237	508 aa	Known RBP	28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	CYP2C8	P10632	490 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	ERVK-9	P63128	1117 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	ERVK-24	P63145	666 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	KRT76	Q01546	638 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	GNPTAB	Q3T906	1256 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	CDKAL1	Q5VV42	579 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	SHCBP1	Q8NEM2	672 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	HPS3	Q969F9	1004 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	BHMT2	Q9H2M3	363 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	R3HDML	Q9H3Y0	253 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	MROH8	Q9H579	483 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	SLC39A2	Q9NP94	309 aa		28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	ADD3	Q9UEY8	706 aa	Known RBP	28.9	■■■□□ 2.22
U2AF1-208	ENST00000471250	NPHP3-ACAD11	A0A0J9YXS1	232 aa		28.89	■■■□□ 2.22
U2AF1-208	ENST00000471250	FRMD3	A2A2Y4	597 aa		28.89	■■■□□ 2.22
U2AF1-208	ENST00000471250	SOWAHB	A6NEL2	793 aa		28.89	■■■□□ 2.22
U2AF1-208	ENST00000471250	CBFA2T2	O43439	604 aa		28.89	■■■□□ 2.22
U2AF1-208	ENST00000471250	EIF3J	O75822	258 aa	Known RBP	28.89	■■■□□ 2.22
U2AF1-208	ENST00000471250	CDK11B	P21127	795 aa	Known RBP	28.89	■■■□□ 2.22
U2AF1-208	ENST00000471250	LXN	Q9BS40	222 aa		28.89	■■■□□ 2.22
U2AF1-208	ENST00000471250	WRAP73	Q9P2S5	460 aa	Predicted RBP	28.89	■■■□□ 2.22
U2AF1-208	ENST00000471250	NFASC	O94856	1347 aa		28.89	■■■□□ 2.22
U2AF1-208	ENST00000471250	SPATA31C2	B4DYI2	1134 aa		28.89	■■■□□ 2.21
U2AF1-208	ENST00000471250	KRT18	P05783	430 aa	Known RBP	28.89	■■■□□ 2.21
U2AF1-208	ENST00000471250	KCNA2	P16389	499 aa		28.89	■■■□□ 2.21
U2AF1-208	ENST00000471250	JAK3	P52333	1124 aa		28.89	■■■□□ 2.21
U2AF1-208	ENST00000471250	UBASH3A	P57075	661 aa		28.89	■■■□□ 2.21
U2AF1-208	ENST00000471250	GIT2	Q14161	759 aa		28.89	■■■□□ 2.21
U2AF1-208	ENST00000471250	TPD52L1	Q16890	204 aa	Predicted RBP	28.89	■■■□□ 2.21
U2AF1-208	ENST00000471250	PIGO	Q8TEQ8	1089 aa		28.89	■■■□□ 2.21
U2AF1-208	ENST00000471250	SENP7	Q9BQF6	1050 aa		28.89	■■■□□ 2.21
U2AF1-208	ENST00000471250	LOXHD1	Q8IVV2	1947 aa		28.88	■■■□□ 2.21
U2AF1-208	ENST00000471250	COBL	O75128	1261 aa		28.88	■■■□□ 2.21
U2AF1-208	ENST00000471250	EDNRB	P24530	442 aa		28.88	■■■□□ 2.21
U2AF1-208	ENST00000471250	CCNE1	P24864	410 aa		28.88	■■■□□ 2.21
U2AF1-208	ENST00000471250	SFN	P31947	248 aa		28.88	■■■□□ 2.21
U2AF1-208	ENST00000471250	BANK1	Q8NDB2	785 aa		28.88	■■■□□ 2.21
U2AF1-208	ENST00000471250	RDM1	Q8NG50	284 aa		28.88	■■■□□ 2.21
U2AF1-208	ENST00000471250	TCEAL9	Q9UHQ7	104 aa		28.88	■■■□□ 2.21
U2AF1-208	ENST00000471250	TPM3	P06753	285 aa		28.87	■■■□□ 2.21
U2AF1-208	ENST00000471250	ICAM3	P32942	547 aa		28.87	■■■□□ 2.21
U2AF1-208	ENST00000471250	HSP90AA4P	Q58FG1	418 aa		28.87	■■■□□ 2.21
U2AF1-208	ENST00000471250	ZNF746	Q6NUN9	644 aa	Predicted RBP	28.87	■■■□□ 2.21
U2AF1-208	ENST00000471250	P2RX5	Q93086	422 aa		28.87	■■■□□ 2.21
U2AF1-208	ENST00000471250	MMP19	Q99542	508 aa		28.87	■■■□□ 2.21
U2AF1-208	ENST00000471250	ZSWIM4	Q9H7M6	989 aa		28.87	■■■□□ 2.21
U2AF1-208	ENST00000471250	WDR64	B1ANS9	1081 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	CCNE2	O96020	404 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	PMS1	P54277	932 aa	Known RBP	28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	FSTL1	Q12841	308 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	RINT1	Q6NUQ1	792 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	GUF1	Q8N442	669 aa	Known RBP	28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	GPRC5A	Q8NFJ5	357 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	SMCR8	Q8TEV9	937 aa	Predicted RBP	28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	SAMM50	Q9Y512	469 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	BICDL2	A1A5D9	508 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	TRIM49B	A6NDI0	452 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	LYPLA2	O95372	231 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	HUNK	P57058	714 aa		28.86	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms