RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 CLTBP09497 229 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 RAG1P15918 1043 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 DEKP35659 375 aaKnown RBP10.28□□□□□ -0.76
PTPRE-207ENST00000471218 PPP1R2P41236 205 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 ADCYAP1R1P41586 468 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 AMPD3Q01432 767 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 POSTNQ15063 836 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 LRRC41Q15345 812 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 SHHQ15465 462 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 E2F4Q16254 413 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 USH1GQ495M9 461 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 HAUS3Q68CZ6 603 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 CNNM4Q6P4Q7 775 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 USP17L6PQ6QN14 398 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 ERMNQ8TAM6 284 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 CLEC4DQ8WXI8 215 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 BADQ92934 168 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 MAML3Q96JK9 1138 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 NT5C3AQ9H0P0 336 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 TMEM60Q9H2L4 133 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 SPC25Q9HBM1 224 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 XPNPEP3Q9NQH7 507 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 FBXO28Q9NVF7 368 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 RMND1Q9NWS8 449 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 ZNF214Q9UL59 606 aaPredicted RBP10.28□□□□□ -0.76
PTPRE-207ENST00000471218 PHF24Q9UPV7 400 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 MOXD2PA6NHM9 499 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 KIAA0355O15063 1070 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 ADAMTS3O15072 1205 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 MAFGO15525 162 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 AKR1A1P14550 325 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 FOSL2P15408 326 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 SARSP49591 514 aaKnown RBP10.27□□□□□ -0.77
PTPRE-207ENST00000471218 CAMK4Q16566 473 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 TRIM60Q495X7 471 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 LONRF3Q496Y0 759 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 CEP55Q53EZ4 464 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 KRT79Q5XKE5 535 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 POTEDQ86YR6 584 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 RIOX2Q8IUF8 465 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 MLKLQ8NB16 471 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 TRPV1Q8NER1 839 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 ETNPPLQ8TBG4 499 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 NEK9Q8TD19 979 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 CALML4Q96GE6 196 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 RNPC3Q96LT9 517 aaKnown RBP10.27□□□□□ -0.77
PTPRE-207ENST00000471218 FAM161BQ96MY7 647 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 MMP19Q99542 508 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 TINF2Q9BSI4 451 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 WDR11Q9BZH6 1224 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 PDLIM7Q9NR12 457 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 TMEM260Q9NX78 707 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 MRVI1Q9Y6F6 885 aa10.27□□□□□ -0.77
PTPRE-207ENST00000471218 VCANP13611 3396 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 IKBKBO14920 756 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 GTPBP6O43824 516 aaPredicted RBP10.26□□□□□ -0.77
PTPRE-207ENST00000471218 SLC37A4O43826 429 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 EDIL3O43854 480 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 COBLO75128 1261 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 TDP2O95551 362 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 CFBP00751 764 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 STAT3P40763 770 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 STAT6P42226 847 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 NLRP12P59046 1061 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 TLE2Q04725 743 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 GRIN1Q05586 938 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 FPGSQ05932 587 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 IL17AQ16552 155 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 RRAGBQ5VZM2 374 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 PDXDC2PQ6P474 469 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 ANKRD33Q7Z3H0 272 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 CABP7Q86V35 215 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 CKAP2LQ8IYA6 745 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 PCSK9Q8NBP7 692 aaKnown RBP10.26□□□□□ -0.77
PTPRE-207ENST00000471218 DNERQ8NFT8 737 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 SMARCE1Q969G3 411 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 LENG9Q96B70 501 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 ATG4CQ96DT6 458 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 EPSTI1Q96J88 318 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 CDHR1Q96JP9 859 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 RIT2Q99578 217 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 SEZ6LQ9BYH1 1024 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 ACAD9Q9H845 621 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 TMEM39AQ9NV64 488 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 KBTBD4Q9NVX7 518 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 LRWD1Q9UFC0 647 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 FAM184BQ9ULE4 1060 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 PCDHA12Q9UN75 941 aa10.26□□□□□ -0.77
PTPRE-207ENST00000471218 A0A0G2JMZ2 1700 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 IGLV3-22A0A075B6J6 115 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 B4DLN1 442 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 MEIS1O00470 390 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 MARCH6O60337 910 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 XRCC6P12956 609 aaKnown RBP eCLIP10.25□□□□□ -0.77
PTPRE-207ENST00000471218 ZNF165P49910 485 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 CCDC173Q0VFZ6 552 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 KCNB1Q14721 858 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 TMEM119Q4V9L6 283 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 FOXR2Q6PJQ5 311 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms