RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 NMIQ13287 307 aaPredicted RBP8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 NBPF9Q3BBW0 867 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 PARP10Q53GL7 1025 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 CCDC93Q567U6 631 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 TDRD10Q5VZ19 366 aaKnown RBP8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 TMPRSS7Q7RTY8 843 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 TSPYL5Q86VY4 417 aaPredicted RBP8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 PI4KAP1Q8N8J0 262 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 CELF1Q92879 486 aaKnown RBP8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 RBM17Q96I25 401 aaKnown RBP8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 CAPN10Q9HC96 672 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 FAM86C1Q9NVL1 165 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 DUSP13Q9UII6 198 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 SH3TC1Q8TE82 1336 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 IRS4O14654 1257 aaPredicted RBP8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 IGKV5-2P06315 115 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 HOXB7P09629 217 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 CALD1Q05682 793 aaKnown RBP8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 CLEC16AQ2KHT3 1053 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 HSP90AB3PQ58FF7 597 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 CCDC30Q5VVM6 783 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 INTS3Q68E01 1043 aaKnown RBP8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 UNC5AQ6ZN44 842 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 TAB3Q8N5C8 712 aaPredicted RBP8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 CPLX3Q8WVH0 158 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 CRAMP1Q96RY5 1269 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 SLAMF8Q9P0V8 285 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 SUCOQ9UBS9 1254 aaKnown RBP8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 PCDHA11Q9Y5I1 949 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 FER1L6Q2WGJ9 1857 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 COL4A5P29400 1685 aa8.53□□□□□ -1.04
PTP4A1-202ENST00000470661 C9IYK1 514 aa8.52□□□□□ -1.05
PTP4A1-202ENST00000470661 TOMM70O94826 608 aa8.52□□□□□ -1.05
PTP4A1-202ENST00000470661 IARSP41252 1262 aaKnown RBP8.52□□□□□ -1.05
PTP4A1-202ENST00000470661 GIPRP48546 466 aa8.52□□□□□ -1.05
PTP4A1-202ENST00000470661 C16orf71Q8IYS4 520 aaPredicted RBP8.52□□□□□ -1.05
PTP4A1-202ENST00000470661 SEC16BQ96JE7 1060 aa8.52□□□□□ -1.05
PTP4A1-202ENST00000470661 PRDM14Q9GZV8 571 aa8.52□□□□□ -1.05
PTP4A1-202ENST00000470661 ASCC2Q9H1I8 757 aaPredicted RBP8.52□□□□□ -1.05
PTP4A1-202ENST00000470661 IGSF5Q9NSI5 407 aa8.52□□□□□ -1.05
PTP4A1-202ENST00000470661 KDM2BQ8NHM5 1336 aa8.52□□□□□ -1.05
PTP4A1-202ENST00000470661 PCNTO95613 3336 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 SHTN1A0MZ66 631 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 HSPA6P17066 643 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 EGR3Q06889 387 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 KSR2Q6VAB6 950 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 DDX46Q7L014 1031 aaKnown RBP8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 PPFIBP1Q86W92 1011 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 WDR63Q8IWG1 891 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 RTKN2Q8IZC4 609 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 SHDQ96IW2 340 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 MINPP1Q9UNW1 487 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 ATP6V0A2Q9Y487 856 aa8.51□□□□□ -1.05
PTP4A1-202ENST00000470661 DNAJC25-GNG10A0A024R161 153 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 PPIP5K2O43314 1243 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 PAPLNO95428 1278 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 VEGFAP15692 232 aaPredicted RBP8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 ITGB5P18084 799 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 GPSM2P81274 684 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 RALGPS1Q5JS13 557 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 DLK2Q6UY11 383 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 TTC6Q86TZ1 520 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 CCDC144CPQ8IYA2 1237 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 DHRS1Q96LJ7 313 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 ALPK1Q96QP1 1244 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 STK31Q9BXU1 1019 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 HDAC8Q9BY41 377 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 CWC25Q9NXE8 425 aaPredicted RBP8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 CTNND2Q9UQB3 1225 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 IL16Q14005 1332 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 RNF123Q5XPI4 1314 aa8.5□□□□□ -1.05
PTP4A1-202ENST00000470661 SNED1Q8TER0 1413 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 LAMB2P55268 1798 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 BBOX1O75936 387 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 RAD17O75943 681 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 PRAMEF1O95521 474 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 TP53P04637 393 aaPredicted RBP8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 ATF4P18848 351 aaPredicted RBP8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 EPS15P42566 896 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 PMS1P54277 932 aaKnown RBP8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 GRAPQ13588 217 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 SF3B3Q15393 1217 aaKnown RBP8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 DPP8Q6V1X1 898 aaPredicted RBP8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 UBE3BQ7Z3V4 1068 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 SP8Q8IXZ3 490 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 FAM169BQ8N8A8 192 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 ZBTB38Q8NAP3 1195 aaPredicted RBP8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 GRAPLQ8TC17 118 aaPredicted RBP8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 ANAPC16Q96DE5 110 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 TINF2Q9BSI4 451 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 C19orf73Q9NVV2 129 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 GFOD1Q9NXC2 390 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 POLLQ9UGP5 575 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 FBXL21Q9UKT6 434 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 LTBP3Q9NS15 1303 aa8.49□□□□□ -1.05
PTP4A1-202ENST00000470661 IBTKQ9P2D0 1353 aaPredicted RBP8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 YDJCA8MPS7 323 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 FZD9O00144 591 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 SNAP23O00161 211 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 MEIS1O00470 390 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms