RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 PFKFB2O60825 505 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 PPFIA3O75145 1194 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 PLEKHA8P1O95397 391 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 LGALS2P05162 132 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 BMP1P13497 986 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 MRPS5P82675 430 aaKnown RBP13.24□□□□□ -0.29
HLA-C-206ENST00000470363 SCRN1Q12765 414 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 CUL4AQ13619 759 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 PCNX4Q63HM2 1172 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 KRT40Q6A162 431 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 APOA5Q6Q788 366 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 METTL7BQ6UX53 244 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 MICU3Q86XE3 530 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 TMTC2Q8N394 836 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 SENP7Q9BQF6 1050 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 LZTS2Q9BRK4 669 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 OSBPL7Q9BZF2 842 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 RNPEPQ9H4A4 650 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 TUT1Q9H6E5 874 aaKnown RBP13.24□□□□□ -0.29
HLA-C-206ENST00000470363 CERS4Q9HA82 394 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 MLXIPQ9HAP2 919 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 SH2B1Q9NRF2 756 aaPredicted RBP13.24□□□□□ -0.29
HLA-C-206ENST00000470363 RTEL1Q9NZ71 1219 aa13.24□□□□□ -0.29
HLA-C-206ENST00000470363 PRRC2BQ5JSZ5 2229 aaKnown RBP13.23□□□□□ -0.29
HLA-C-206ENST00000470363 KIF28PB7ZC32 967 aa13.23□□□□□ -0.29
HLA-C-206ENST00000470363 FIBPO43427 364 aa13.23□□□□□ -0.29
HLA-C-206ENST00000470363 GJB5O95377 273 aa13.23□□□□□ -0.29
HLA-C-206ENST00000470363 HSP90AA1P07900 732 aaKnown RBP13.23□□□□□ -0.29
HLA-C-206ENST00000470363 NEDD9Q14511 834 aa13.23□□□□□ -0.29
HLA-C-206ENST00000470363 GNPTABQ3T906 1256 aa13.23□□□□□ -0.29
HLA-C-206ENST00000470363 XRRA1Q6P2D8 792 aa13.23□□□□□ -0.29
HLA-C-206ENST00000470363 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
HLA-C-206ENST00000470363 CYFIP1Q7L576 1253 aa13.23□□□□□ -0.29
HLA-C-206ENST00000470363 PIBF1Q8WXW3 757 aa13.23□□□□□ -0.29
HLA-C-206ENST00000470363 RRP36Q96EU6 259 aaKnown RBP13.23□□□□□ -0.29
HLA-C-206ENST00000470363 MYH7BA7E2Y1 1941 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 PTPRSQ13332 1948 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 GOLGA8AA7E2F4 631 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 TNFRSF10AO00220 468 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 TREHO43280 583 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 TLL1O43897 1013 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 ATP9AO75110 1047 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 SMIM10L2AP0DMW4 78 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 SMIM10L2BP0DMW5 78 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 ITGB5P18084 799 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 CDC27P30260 824 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 KIF5BP33176 963 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 METAP2P50579 478 aaKnown RBP eCLIP13.22□□□□□ -0.29
HLA-C-206ENST00000470363 GRB10Q13322 594 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 PLEKHG4Q58EX7 1191 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.291e-31■■■■□ 24.7
HLA-C-206ENST00000470363 CMTR1Q8N1G2 835 aaKnown RBP13.22□□□□□ -0.29
HLA-C-206ENST00000470363 DBF4BQ8NFT6 615 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 CTCFLQ8NI51 663 aaPredicted RBP13.22□□□□□ -0.29
HLA-C-206ENST00000470363 ARNTL2Q8WYA1 636 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 GTF3C6Q969F1 213 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 RAD9AQ99638 391 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 BDP1A6H8Y1 2624 aa13.22□□□□□ -0.29
HLA-C-206ENST00000470363 C17orf102A2RUQ5 167 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 RSPH10B2B2RC85 870 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 EFCAB14O75071 495 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 LGR5O75473 907 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 RSPH10BP0C881 870 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 ADD1P35611 737 aaKnown RBP13.21□□□□□ -0.29
HLA-C-206ENST00000470363 THPOP40225 353 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 KCNJ6P48051 423 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 GNAQP50148 359 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 TFF2Q03403 129 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 FUT2Q10981 343 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 IKBKEQ14164 716 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 FANCBQ8NB91 859 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 ATP6V0A1Q93050 837 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 RNF39Q9H2S5 420 aa13.21□□□□□ -0.29
HLA-C-206ENST00000470363 FAM217BQ9NTX9 383 aaPredicted RBP13.21□□□□□ -0.29
HLA-C-206ENST00000470363 EMSYQ7Z589 1322 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 LINC01553A4QN01 128 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 JAK2O60674 1132 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 CAND2O75155 1236 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 CTDNEP1O95476 244 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 KCNA2P16389 499 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 ERVK-21P61565 698 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
HLA-C-206ENST00000470363 RTN1Q16799 776 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 FAM26DQ5JW98 314 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 TMTC3Q6ZXV5 915 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 TRIM50Q86XT4 487 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 SMARCC2Q8TAQ2 1214 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 ADAMTS19Q8TE59 1207 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 GPRASP2Q96D09 838 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 PSTPIP2Q9H939 334 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 SUGCTQ9HAC7 445 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 SETD4Q9NVD3 440 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 LMCD1Q9NZU5 365 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 UBIAD1Q9Y5Z9 338 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 NCOR1O75376 2440 aa13.2□□□□□ -0.3
HLA-C-206ENST00000470363 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
HLA-C-206ENST00000470363 NOP56O00567 594 aaKnown RBP13.19□□□□□ -0.3
HLA-C-206ENST00000470363 CALM1P0DP23 149 aa13.19□□□□□ -0.3
HLA-C-206ENST00000470363 CALM2P0DP24 149 aa13.19□□□□□ -0.3
HLA-C-206ENST00000470363 CALM3P0DP25 149 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms