RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 KLF18A0A0U1RQI7 1052 aa35.88■■■■□ 3.33
HMG20B-209ENST00000470356 EPOPA6NHQ4 379 aa35.88■■■■□ 3.33
HMG20B-209ENST00000470356 RCAN1P53805 252 aa35.88■■■■□ 3.33
HMG20B-209ENST00000470356 NAPAP54920 295 aa35.88■■■■□ 3.33
HMG20B-209ENST00000470356 TYW1BQ6NUM6 668 aa35.88■■■■□ 3.33
HMG20B-209ENST00000470356 DBF4BQ8NFT6 615 aa35.88■■■■□ 3.33
HMG20B-209ENST00000470356 ARNTL2Q8WYA1 636 aa35.88■■■■□ 3.33
HMG20B-209ENST00000470356 SEPT1Q8WYJ6 367 aa35.88■■■■□ 3.33
HMG20B-209ENST00000470356 KCNB2Q92953 911 aa35.88■■■■□ 3.33
HMG20B-209ENST00000470356 RAD9AQ99638 391 aa35.88■■■■□ 3.33
HMG20B-209ENST00000470356 GSTTP1A0A1W2PQM5 241 aa35.87■■■■□ 3.33
HMG20B-209ENST00000470356 hCG_1984214I3L0E3 225 aa35.87■■■■□ 3.33
HMG20B-209ENST00000470356 PLEKHG4Q58EX7 1191 aa35.87■■■■□ 3.33
HMG20B-209ENST00000470356 ZNF713Q8N859 430 aaPredicted RBP35.87■■■■□ 3.33
HMG20B-209ENST00000470356 LMBR1Q8WVP7 490 aa35.87■■■■□ 3.33
HMG20B-209ENST00000470356 FAM217BQ9NTX9 383 aaPredicted RBP35.87■■■■□ 3.33
HMG20B-209ENST00000470356 MTCH2Q9Y6C9 303 aa35.87■■■■□ 3.33
HMG20B-209ENST00000470356 NRCAMQ92823 1304 aa35.86■■■■□ 3.33
HMG20B-209ENST00000470356 SPTBN5Q9NRC6 3674 aaKnown RBP35.86■■■■□ 3.33
HMG20B-209ENST00000470356 LCHNA4D1U4 455 aa35.86■■■■□ 3.33
HMG20B-209ENST00000470356 GOLGA8AA7E2F4 631 aa35.86■■■■□ 3.33
HMG20B-209ENST00000470356 GOLGA8BA8MQT2 603 aa35.86■■■■□ 3.33
HMG20B-209ENST00000470356 CCDC136Q96JN2 1154 aa35.86■■■■□ 3.33
HMG20B-209ENST00000470356 GTPBP6O43824 516 aaPredicted RBP35.85■■■■□ 3.33
HMG20B-209ENST00000470356 FOSP01100 380 aaPredicted RBP35.85■■■■□ 3.33
HMG20B-209ENST00000470356 ARHGAP4P98171 946 aa35.85■■■■□ 3.33
HMG20B-209ENST00000470356 MKRN4PQ13434 485 aaPredicted RBP35.85■■■■□ 3.33
HMG20B-209ENST00000470356 RBAK-RBAKDNI3L0D1 243 aa35.84■■■■□ 3.33
HMG20B-209ENST00000470356 STXBP3O00186 592 aa35.84■■■■□ 3.33
HMG20B-209ENST00000470356 CDC27P30260 824 aa35.84■■■■□ 3.33
HMG20B-209ENST00000470356 ADCY7P51828 1080 aa35.84■■■■□ 3.33
HMG20B-209ENST00000470356 MICALL1Q8N3F8 863 aa35.84■■■■□ 3.33
HMG20B-209ENST00000470356 MXRA8Q9BRK3 442 aa35.84■■■■□ 3.33
HMG20B-209ENST00000470356 TSPYL2Q9H2G4 693 aaPredicted RBP35.84■■■■□ 3.33
HMG20B-209ENST00000470356 BARHL2Q9NY43 387 aa35.84■■■■□ 3.33
HMG20B-209ENST00000470356 ERAP1Q9NZ08 941 aa35.84■■■■□ 3.33
HMG20B-209ENST00000470356 PKD2L1Q9P0L9 805 aa35.84■■■■□ 3.33
HMG20B-209ENST00000470356 REV3LO60673 3130 aa35.83■■■■□ 3.33
HMG20B-209ENST00000470356 FGD1P98174 961 aa35.83■■■■□ 3.33
HMG20B-209ENST00000470356 LIN28BQ6ZN17 250 aaKnown RBP eCLIP35.83■■■■□ 3.33
HMG20B-209ENST00000470356 SEPT8Q92599 483 aa35.83■■■■□ 3.33
HMG20B-209ENST00000470356 ASB2Q96Q27 587 aa35.83■■■■□ 3.33
HMG20B-209ENST00000470356 GLT8D2Q9H1C3 349 aa35.83■■■■□ 3.33
HMG20B-209ENST00000470356 KCNH7Q9NS40 1196 aa35.83■■■■□ 3.33
HMG20B-209ENST00000470356 SMCO2A6NFE2 343 aa35.82■■■■□ 3.32
HMG20B-209ENST00000470356 CTSHP09668 335 aa35.82■■■■□ 3.32
HMG20B-209ENST00000470356 HSPA4P34932 840 aa35.82■■■■□ 3.32
HMG20B-209ENST00000470356 MRPS5P82675 430 aaKnown RBP35.82■■■■□ 3.32
HMG20B-209ENST00000470356 FAM26DQ5JW98 314 aa35.82■■■■□ 3.32
HMG20B-209ENST00000470356 SPRED2Q7Z698 418 aa35.82■■■■□ 3.32
HMG20B-209ENST00000470356 SMARCAD1Q9H4L7 1026 aa35.82■■■■□ 3.32
HMG20B-209ENST00000470356 AMHP03971 560 aa35.81■■■■□ 3.32
HMG20B-209ENST00000470356 CPA1P15085 419 aa35.81■■■■□ 3.32
HMG20B-209ENST00000470356 RPAINQ86UA6 219 aa35.81■■■■□ 3.32
HMG20B-209ENST00000470356 GLG1Q92896 1179 aa35.81■■■■□ 3.32
HMG20B-209ENST00000470356 JPH1Q9HDC5 661 aaPredicted RBP35.81■■■■□ 3.32
HMG20B-209ENST00000470356 NAP1L2Q9ULW6 460 aaPredicted RBP35.81■■■■□ 3.32
HMG20B-209ENST00000470356 CCDC196A0A1B0GTZ2 297 aa35.8■■■■□ 3.32
HMG20B-209ENST00000470356 PPFIA1Q13136 1202 aa35.8■■■■□ 3.32
HMG20B-209ENST00000470356 CYP2W1Q8TAV3 490 aa35.8■■■■□ 3.32
HMG20B-209ENST00000470356 JAKMIP1Q96N16 626 aaKnown RBP35.8■■■■□ 3.32
HMG20B-209ENST00000470356 ANO3Q9BYT9 981 aa35.8■■■■□ 3.32
HMG20B-209ENST00000470356 OSBPL7Q9BZF2 842 aa35.8■■■■□ 3.32
HMG20B-209ENST00000470356 INSL6Q9Y581 213 aa35.8■■■■□ 3.32
HMG20B-209ENST00000470356 ADD1P35611 737 aaKnown RBP35.79■■■■□ 3.32
HMG20B-209ENST00000470356 GRB10Q13322 594 aa35.79■■■■□ 3.32
HMG20B-209ENST00000470356 CEP55Q53EZ4 464 aa35.79■■■■□ 3.32
HMG20B-209ENST00000470356 FAM117BQ6P1L5 589 aa35.79■■■■□ 3.32
HMG20B-209ENST00000470356 TAF2Q6P1X5 1199 aa35.79■■■■□ 3.32
HMG20B-209ENST00000470356 PGBD1Q96JS3 809 aa35.79■■■■□ 3.32
HMG20B-209ENST00000470356 SLC9A2Q9UBY0 812 aa35.79■■■■□ 3.32
HMG20B-209ENST00000470356 SNX14Q9Y5W7 946 aa35.79■■■■□ 3.32
HMG20B-209ENST00000470356 LPXNO60711 386 aa35.78■■■■□ 3.32
HMG20B-209ENST00000470356 MARK3P27448 753 aa35.78■■■■□ 3.32
HMG20B-209ENST00000470356 METAP2P50579 478 aaKnown RBP eCLIP35.78■■■■□ 3.32
HMG20B-209ENST00000470356 APOBRQ0VD83 1088 aa35.78■■■■□ 3.32
HMG20B-209ENST00000470356 AP3B2Q13367 1082 aa35.78■■■■□ 3.32
HMG20B-209ENST00000470356 Q6ZUG5 572 aa35.78■■■■□ 3.32
HMG20B-209ENST00000470356 NFASCO94856 1347 aa35.78■■■■□ 3.32
HMG20B-209ENST00000470356 LINC01553A4QN01 128 aa35.77■■■■□ 3.32
HMG20B-209ENST00000470356 CLK2P49760 499 aaKnown RBP35.77■■■■□ 3.32
HMG20B-209ENST00000470356 ERVK-21P61565 698 aa35.77■■■■□ 3.32
HMG20B-209ENST00000470356 GRIK4Q16099 956 aa35.77■■■■□ 3.32
HMG20B-209ENST00000470356 PFKFB3Q16875 520 aaPredicted RBP35.77■■■■□ 3.32
HMG20B-209ENST00000470356 KRT40Q6A162 431 aa35.77■■■■□ 3.32
HMG20B-209ENST00000470356 BLOC1S2Q6QNY1 142 aa35.77■■■■□ 3.32
HMG20B-209ENST00000470356 MYOCDQ8IZQ8 938 aa35.77■■■■□ 3.32
HMG20B-209ENST00000470356 FBXL16Q8N461 479 aa35.77■■■■□ 3.32
HMG20B-209ENST00000470356 TGS1Q96RS0 853 aaKnown RBP35.77■■■■□ 3.32
HMG20B-209ENST00000470356 SDF4Q9BRK5 362 aa35.77■■■■□ 3.32
HMG20B-209ENST00000470356 BRWD1Q9NSI6 2320 aa35.77■■■■□ 3.32
HMG20B-209ENST00000470356 MBLAC1A4D2B0 266 aaPredicted RBP35.76■■■■□ 3.32
HMG20B-209ENST00000470356 SREBF1P36956 1147 aa35.76■■■■□ 3.32
HMG20B-209ENST00000470356 HTRA4P83105 476 aaPredicted RBP35.76■■■■□ 3.32
HMG20B-209ENST00000470356 RUFY4Q6ZNE9 571 aa35.76■■■■□ 3.32
HMG20B-209ENST00000470356 BRF1Q92994 677 aa35.76■■■■□ 3.32
HMG20B-209ENST00000470356 PCYT2Q99447 389 aa35.76■■■■□ 3.32
HMG20B-209ENST00000470356 TMEM260Q9NX78 707 aa35.76■■■■□ 3.32
HMG20B-209ENST00000470356 TUBE1Q9UJT0 475 aa35.76■■■■□ 3.32
HMG20B-209ENST00000470356 MEIS1O00470 390 aa35.75■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms