RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
SREBF1-209ENST00000470247 JPH1Q9HDC5 661 aaPredicted RBP12.67□□□□□ -0.38
SREBF1-209ENST00000470247 LRWD1Q9UFC0 647 aa12.67□□□□□ -0.38
SREBF1-209ENST00000470247 FAM184BQ9ULE4 1060 aa12.67□□□□□ -0.38
SREBF1-209ENST00000470247 IGKV6D-21A0A0A0MT36 114 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 A0A1B0GVL5 298 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 NKRFO15226 690 aaKnown RBP eCLIP12.66□□□□□ -0.38
SREBF1-209ENST00000470247 CTAGE5O15320 804 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 SEPT4O43236 478 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 CHMP2AO43633 222 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 MED24O75448 989 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 SLITRK3O94933 977 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 GH1P01241 217 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 HOXD8P13378 290 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-209ENST00000470247 LIG1P18858 919 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 IRX5P78411 483 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-209ENST00000470247 GRB10Q13322 594 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 SNW1Q13573 536 aaKnown RBP12.66□□□□□ -0.38
SREBF1-209ENST00000470247 LAMC2Q13753 1193 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 TMEM266Q2M3C6 531 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 HSDL1Q3SXM5 330 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 TPRNQ4KMQ1 711 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 HYIQ5T013 277 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 NCAPH2Q6IBW4 605 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 CATSPER3Q86XQ3 398 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 DHX37Q8IY37 1157 aaKnown RBP12.66□□□□□ -0.38
SREBF1-209ENST00000470247 FSIP1Q8NA03 581 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 RDM1Q8NG50 284 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 PNMA5Q96PV4 448 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 GPR20Q99678 358 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 EIF2AK1Q9BQI3 630 aaKnown RBP12.66□□□□□ -0.38
SREBF1-209ENST00000470247 MLXIPQ9HAP2 919 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 DISC1Q9NRI5 854 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 RGL1Q9NZL6 768 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 WRAP73Q9P2S5 460 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-209ENST00000470247 Q9Y3F1 56 aa12.66□□□□□ -0.38
SREBF1-209ENST00000470247 DOCK5Q9H7D0 1870 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 GOLGA6L22H0YM25 854 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 AKR1A1P14550 325 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 PFKFB1P16118 471 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 RPA1P27694 616 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 SFNP31947 248 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 NDUFA8P51970 172 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 NKX3-2P78367 333 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 SP4Q02446 784 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 KARSQ15046 597 aaKnown RBP12.65□□□□□ -0.38
SREBF1-209ENST00000470247 NAALADL2Q58DX5 795 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 MIER3Q7Z3K6 550 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 CABP7Q86V35 215 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 SH3TC2Q8TF17 1288 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 AFG1LQ8WV93 481 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 SEPT1Q8WYJ6 367 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 MRPS27Q92552 414 aaKnown RBP12.65□□□□□ -0.38
SREBF1-209ENST00000470247 POLR3CQ9BUI4 534 aaPredicted RBP12.65□□□□□ -0.38
SREBF1-209ENST00000470247 RAB34Q9BZG1 259 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 PCDHA10Q9Y5I2 948 aa12.65□□□□□ -0.38
SREBF1-209ENST00000470247 A0A087WWV3 80 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 DDX11L8A8MPP1 907 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 WDR64B1ANS9 1081 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 DYNC1LI2O43237 492 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-209ENST00000470247 DUSP11O75319 330 aaKnown RBP12.64□□□□□ -0.39
SREBF1-209ENST00000470247 LGR5O75473 907 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 STBD1O95210 358 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 P4HBP07237 508 aaKnown RBP12.64□□□□□ -0.39
SREBF1-209ENST00000470247 SUPT20HL2P0C7V6 817 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 UBA7P41226 1012 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 JAK3P52333 1124 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 E2F4Q16254 413 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 UGCGQ16739 394 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 TMEM119Q4V9L6 283 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 KRT79Q5XKE5 535 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 FBXO46Q6PJ61 603 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-209ENST00000470247 KCNK18Q7Z418 384 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 CCDC60Q8IWA6 550 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-209ENST00000470247 SMAP1Q8IYB5 467 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-209ENST00000470247 FMR1NBQ8N0W7 255 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-209ENST00000470247 PPTC7Q8NI37 304 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 SNX29Q8TEQ0 813 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 DYDC2Q96IM9 177 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 SPATA33Q96N06 139 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 PANK2Q9BZ23 570 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 UPF3AQ9H1J1 476 aaKnown RBP12.64□□□□□ -0.39
SREBF1-209ENST00000470247 KCNH3Q9ULD8 1083 aa12.64□□□□□ -0.39
SREBF1-209ENST00000470247 HTTP42858 3142 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 POTEB3A0JP26 581 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 MYADML2A6NDP7 307 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 GOLGA6L4A6NEF3 574 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 A6NJR5 290 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 ZBTB39O15060 712 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 SLC26A4O43511 780 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 ZNF862O60290 1169 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 NR1I2O75469 434 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 ATP4AP20648 1035 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 CCT6AP40227 531 aaKnown RBP12.63□□□□□ -0.39
SREBF1-209ENST00000470247 GJA9P57773 515 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 PSMC6P62333 389 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 CYP4A11Q02928 519 aa12.63□□□□□ -0.39
SREBF1-209ENST00000470247 CTTNQ14247 550 aaKnown RBP12.63□□□□□ -0.39
SREBF1-209ENST00000470247 MTFR1Q15390 333 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms