RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 FILIP1Q7Z7B0 1213 aa20.21■□□□□ 0.83
SMC4-211ENST00000469858 PIGOQ8TEQ8 1089 aa20.21■□□□□ 0.83
SMC4-211ENST00000469858 DHTKD1Q96HY7 919 aaPredicted RBP20.21■□□□□ 0.83
SMC4-211ENST00000469858 MAF1Q9H063 256 aa20.21■□□□□ 0.83
SMC4-211ENST00000469858 BHMT2Q9H2M3 363 aa20.21■□□□□ 0.83
SMC4-211ENST00000469858 GBA2Q9HCG7 927 aaPredicted RBP20.21■□□□□ 0.83
SMC4-211ENST00000469858 CNMDO75829 334 aa20.2■□□□□ 0.82
SMC4-211ENST00000469858 ARSHQ5FYA8 562 aa20.2■□□□□ 0.82
SMC4-211ENST00000469858 MOV10L1Q9BXT6 1211 aaKnown RBP20.2■□□□□ 0.82
SMC4-211ENST00000469858 TBC1D22BQ9NU19 505 aa20.2■□□□□ 0.82
SMC4-211ENST00000469858 LOXHD1Q8IVV2 1947 aa20.2■□□□□ 0.82
SMC4-211ENST00000469858 PFASO15067 1338 aa20.2■□□□□ 0.82
SMC4-211ENST00000469858 UNCXA6NJT0 531 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 EYA4O95677 639 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 PPP1R2P41236 205 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 EHHADHQ08426 723 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 TMC6Q7Z403 805 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 CCDC65Q8IXS2 484 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 KCTD17Q8N5Z5 321 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 BANK1Q8NDB2 785 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 TRIM47Q96LD4 638 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 TXNRD2Q9NNW7 524 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 RRAGDQ9NQL2 400 aaPredicted RBP20.19■□□□□ 0.82
SMC4-211ENST00000469858 SAMM50Q9Y512 469 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 DOCK5Q9H7D0 1870 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 ATP9AO75110 1047 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 CELF2O95319 508 aaKnown RBP20.19■□□□□ 0.82
SMC4-211ENST00000469858 CNTN2Q02246 1040 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 MKRN3Q13064 507 aaKnown RBP20.19■□□□□ 0.82
SMC4-211ENST00000469858 PSMD2Q13200 908 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 COBLL1Q53SF7 1204 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 NLRX1Q86UT6 975 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 P2RX5Q93086 422 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 GPRASP2Q96D09 838 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 LXNQ9BS40 222 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 KCNF1Q9H3M0 494 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 NMRK2Q9NPI5 230 aa20.19■□□□□ 0.82
SMC4-211ENST00000469858 WRAP73Q9P2S5 460 aaPredicted RBP20.19■□□□□ 0.82
SMC4-211ENST00000469858 FKBP1BP68106 108 aa20.18■□□□□ 0.82
SMC4-211ENST00000469858 TTI2Q6NXR4 508 aa20.18■□□□□ 0.82
SMC4-211ENST00000469858 FAM43AQ8N2R8 423 aa20.18■□□□□ 0.82
SMC4-211ENST00000469858 ZNF526Q8TF50 670 aaPredicted RBP20.18■□□□□ 0.82
SMC4-211ENST00000469858 INPP4AQ96PE3 977 aaPredicted RBP20.18■□□□□ 0.82
SMC4-211ENST00000469858 ZHX3Q9H4I2 956 aa20.18■□□□□ 0.82
SMC4-211ENST00000469858 INTS13Q9NVM9 706 aa20.18■□□□□ 0.82
SMC4-211ENST00000469858 RBPJLQ9UBG7 517 aa20.18■□□□□ 0.82
SMC4-211ENST00000469858 ZBTB39O15060 712 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 ERCC3P19447 782 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 MUTP22033 750 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 CCNE1P24864 410 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 FAM26FQ5R3K3 315 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 C2orf69Q8N8R5 385 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 NEK9Q8TD19 979 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 RUSC1Q9BVN2 902 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 TBC1D7Q9P0N9 293 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 BICDL2A1A5D9 508 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 RGS20O76081 388 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 GIT2Q14161 759 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 LRRC41Q15345 812 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 PTPN21Q16825 1174 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 GLIS3Q8NEA6 775 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 DNERQ8NFT8 737 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 NACC1Q96RE7 527 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 REEP2Q9BRK0 252 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 TCEAL9Q9UHQ7 104 aa20.17■□□□□ 0.82
SMC4-211ENST00000469858 ASTN1O14525 1302 aa20.16■□□□□ 0.82
SMC4-211ENST00000469858 HERC4Q5GLZ8 1057 aaPredicted RBP20.16■□□□□ 0.82
SMC4-211ENST00000469858 APTXQ7Z2E3 356 aaKnown RBP20.16■□□□□ 0.82
SMC4-211ENST00000469858 CREBRFQ8IUR6 639 aa20.16■□□□□ 0.82
SMC4-211ENST00000469858 GUF1Q8N442 669 aaKnown RBP20.16■□□□□ 0.82
SMC4-211ENST00000469858 IWS1Q96ST2 819 aa20.16■□□□□ 0.82
SMC4-211ENST00000469858 R3HDMLQ9H3Y0 253 aa20.16■□□□□ 0.82
SMC4-211ENST00000469858 IMPACTQ9P2X3 320 aa20.16■□□□□ 0.82
SMC4-211ENST00000469858 WDR81Q562E7 1941 aa20.16■□□□□ 0.82
SMC4-211ENST00000469858 FRMD3A2A2Y4 597 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 POTEB2H3BUK9 544 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 STAM2O75886 525 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 SLC25A27O95847 323 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 CYP2C8P10632 490 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 Q3C1V9 767 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 ANKRD40Q6AI12 368 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 SRRTQ9BXP5 876 aaKnown RBP20.15■□□□□ 0.82
SMC4-211ENST00000469858 PNMA3Q9UL41 463 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 A0A1B0GTH6 734 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 KCNJ18B7U540 433 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 MAFGO15525 162 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 P4HBP07237 508 aaKnown RBP20.15■□□□□ 0.82
SMC4-211ENST00000469858 CETPP11597 493 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 ALDH5A1P51649 535 aaPredicted RBP20.15■□□□□ 0.82
SMC4-211ENST00000469858 KRT76Q01546 638 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 SPAG1Q07617 926 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 LRMPQ12912 555 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 KCNJ12Q14500 433 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 ARID5BQ14865 1188 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 GNPTABQ3T906 1256 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 RINT1Q6NUQ1 792 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 VSTM4Q8IW00 320 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 CSGALNACT2Q8N6G5 542 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 CTAGE1Q96RT6 745 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 DUSP9Q99956 384 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms