RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 BTG3Q14201 252 aaPredicted RBP21.15■□□□□ 0.98
TTC28-205ENST00000469670 NEDD9Q14511 834 aa21.15■□□□□ 0.98
TTC28-205ENST00000469670 GNPTABQ3T906 1256 aa21.15■□□□□ 0.98
TTC28-205ENST00000469670 IER5LQ5T953 404 aa21.15■□□□□ 0.98
TTC28-205ENST00000469670 TRIM67Q6ZTA4 783 aa21.15■□□□□ 0.98
TTC28-205ENST00000469670 CYFIP1Q7L576 1253 aa21.15■□□□□ 0.98
TTC28-205ENST00000469670 LMBR1Q8WVP7 490 aa21.15■□□□□ 0.98
TTC28-205ENST00000469670 PBXIP1Q96AQ6 731 aa21.15■□□□□ 0.98
TTC28-205ENST00000469670 ZNF215Q9UL58 517 aaPredicted RBP21.15■□□□□ 0.98
TTC28-205ENST00000469670 SDSP20132 328 aa21.14■□□□□ 0.97
TTC28-205ENST00000469670 ICAM3P32942 547 aa21.14■□□□□ 0.97
TTC28-205ENST00000469670 NDUFV1P49821 464 aa21.14■□□□□ 0.97
TTC28-205ENST00000469670 IFIT1BQ5T764 474 aaKnown RBP21.14■□□□□ 0.97
TTC28-205ENST00000469670 UTP14CQ5TAP6 766 aaKnown RBP21.14■□□□□ 0.97
TTC28-205ENST00000469670 ZNF689Q96CS4 500 aaPredicted RBP21.14■□□□□ 0.97
TTC28-205ENST00000469670 MSLNLQ96KJ4 702 aa21.14■□□□□ 0.97
TTC28-205ENST00000469670 UBAC1Q9BSL1 405 aa21.14■□□□□ 0.97
TTC28-205ENST00000469670 PLVAPQ9BX97 442 aa21.14■□□□□ 0.97
TTC28-205ENST00000469670 EHMT1Q9H9B1 1298 aa21.14■□□□□ 0.97
TTC28-205ENST00000469670 ALG13Q9NP73 1137 aaKnown RBP21.14■□□□□ 0.97
TTC28-205ENST00000469670 SUPT16HQ9Y5B9 1047 aaKnown RBP21.14■□□□□ 0.97
TTC28-205ENST00000469670 SPATA31C2B4DYI2 1134 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 ENPP3O14638 875 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 EYA4O95677 639 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 MRPS9P82933 396 aaKnown RBP21.13■□□□□ 0.97
TTC28-205ENST00000469670 CAMK1Q14012 370 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 PKN1Q16512 942 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 HOMER1Q86YM7 354 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 PPP2R3CQ969Q6 453 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 INPP4AQ96PE3 977 aaPredicted RBP21.13■□□□□ 0.97
TTC28-205ENST00000469670 PRRX2Q99811 253 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 MAD2L2Q9UI95 211 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 PLAGL2Q9UPG8 496 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 TECTAO75443 2155 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 C5orf42Q9H799 3197 aa21.13■□□□□ 0.97
TTC28-205ENST00000469670 NRCAMQ92823 1304 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 ST18O60284 1047 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 STAM2O75886 525 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 MGAT3Q09327 533 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 TRAF1Q13077 416 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 SEMA3FQ13275 785 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 LPIN1Q14693 890 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 RUFY4Q6ZNE9 571 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 SUGP1Q8IWZ8 645 aaKnown RBP21.12■□□□□ 0.97
TTC28-205ENST00000469670 KRT23Q9C075 422 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 TELO2Q9Y4R8 837 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 TRIOO75962 3097 aa21.12■□□□□ 0.97
TTC28-205ENST00000469670 PALM3A6NDB9 673 aaPredicted RBP21.11■□□□□ 0.97
TTC28-205ENST00000469670 FIBPO43427 364 aa21.11■□□□□ 0.97
TTC28-205ENST00000469670 DGKIO75912 1065 aa21.11■□□□□ 0.97
TTC28-205ENST00000469670 ZXDAP98168 799 aa21.11■□□□□ 0.97
TTC28-205ENST00000469670 IMMTQ16891 758 aaKnown RBP21.11■□□□□ 0.97
TTC28-205ENST00000469670 DIEXFQ68CQ4 756 aaKnown RBP21.11■□□□□ 0.97
TTC28-205ENST00000469670 TAF2Q6P1X5 1199 aa21.11■□□□□ 0.97
TTC28-205ENST00000469670 P2RX5Q93086 422 aa21.11■□□□□ 0.97
TTC28-205ENST00000469670 PIGSQ96S52 555 aa21.11■□□□□ 0.97
TTC28-205ENST00000469670 RTEL1Q9NZ71 1219 aa21.11■□□□□ 0.97
TTC28-205ENST00000469670 CLEC1BQ9P126 229 aa21.11■□□□□ 0.97
TTC28-205ENST00000469670 MYH6P13533 1939 aa21.11■□□□□ 0.97
TTC28-205ENST00000469670 ATG2AQ2TAZ0 1938 aa21.11■□□□□ 0.97
TTC28-205ENST00000469670 FRMPD4Q14CM0 1322 aa21.1■□□□□ 0.97
TTC28-205ENST00000469670 LOC730098B7Z3J9 87 aa21.1■□□□□ 0.97
TTC28-205ENST00000469670 DNAJB1P25685 340 aa21.1■□□□□ 0.97
TTC28-205ENST00000469670 RRP1P56182 461 aaKnown RBP21.1■□□□□ 0.97
TTC28-205ENST00000469670 SP4Q02446 784 aa21.1■□□□□ 0.97
TTC28-205ENST00000469670 TCF15Q12870 199 aa21.1■□□□□ 0.97
TTC28-205ENST00000469670 SLC35G1Q2M3R5 365 aa21.1■□□□□ 0.97
TTC28-205ENST00000469670 ADGRD2Q7Z7M1 963 aa21.1■□□□□ 0.97
TTC28-205ENST00000469670 EFHBQ8N7U6 833 aa21.1■□□□□ 0.97
TTC28-205ENST00000469670 SMRP1Q8NCR6 262 aa21.1■□□□□ 0.97
TTC28-205ENST00000469670 MRPL42Q9Y6G3 142 aaKnown RBP21.1■□□□□ 0.97
TTC28-205ENST00000469670 ITGB1P05556 798 aa21.09■□□□□ 0.97
TTC28-205ENST00000469670 COASYQ13057 564 aa21.09■□□□□ 0.97
TTC28-205ENST00000469670 SEC23AQ15436 765 aa21.09■□□□□ 0.97
TTC28-205ENST00000469670 NAALADL2Q58DX5 795 aa21.09■□□□□ 0.97
TTC28-205ENST00000469670 CWC27Q6UX04 472 aaKnown RBP21.09■□□□□ 0.97
TTC28-205ENST00000469670 RSPH3Q86UC2 560 aa21.09■□□□□ 0.97
TTC28-205ENST00000469670 FBXL6Q8N531 539 aa21.09■□□□□ 0.97
TTC28-205ENST00000469670 SPPL3Q8TCT6 385 aa21.09■□□□□ 0.97
TTC28-205ENST00000469670 RIOX1Q9H6W3 641 aa21.09■□□□□ 0.97
TTC28-205ENST00000469670 CNNM2Q9H8M5 875 aa21.09■□□□□ 0.97
TTC28-205ENST00000469670 CBX2Q14781 532 aaPredicted RBP21.08■□□□□ 0.97
TTC28-205ENST00000469670 FBXO47Q5MNV8 452 aa21.08■□□□□ 0.97
TTC28-205ENST00000469670 TSHZ1Q6ZSZ6 1077 aa21.08■□□□□ 0.97
TTC28-205ENST00000469670 CMTR2Q8IYT2 770 aaKnown RBP21.08■□□□□ 0.97
TTC28-205ENST00000469670 SENP7Q9BQF6 1050 aa21.08■□□□□ 0.97
TTC28-205ENST00000469670 DSCC1Q9BVC3 393 aa21.08■□□□□ 0.97
TTC28-205ENST00000469670 LAMA4Q16363 1823 aa21.07■□□□□ 0.96
TTC28-205ENST00000469670 NRIP1P48552 1158 aa21.07■□□□□ 0.96
TTC28-205ENST00000469670 PPFIA1Q13136 1202 aa21.07■□□□□ 0.96
TTC28-205ENST00000469670 KLHL23Q8NBE8 558 aa21.07■□□□□ 0.96
TTC28-205ENST00000469670 DNAJB3Q8WWF6 145 aa21.07■□□□□ 0.96
TTC28-205ENST00000469670 LINC01599Q8WXQ3 324 aa21.07■□□□□ 0.96
TTC28-205ENST00000469670 LNPKQ9C0E8 428 aa21.07■□□□□ 0.96
TTC28-205ENST00000469670 DIAPH3Q9NSV4 1193 aa21.07■□□□□ 0.96
TTC28-205ENST00000469670 CDY2AQ9Y6F7 541 aa21.07■□□□□ 0.96
TTC28-205ENST00000469670 PNMA6FA0A0J9YX94 578 aa21.06■□□□□ 0.96
TTC28-205ENST00000469670 GRM4Q14833 912 aa21.06■□□□□ 0.96
TTC28-205ENST00000469670 CYB5R4Q7L1T6 521 aa21.06■□□□□ 0.96
TTC28-205ENST00000469670 RBM23Q86U06 439 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms