RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 AOC1P19801 751 aa14.83□□□□□ -0.04
HDAC6-217ENST00000469223 TECP42680 631 aa14.83□□□□□ -0.04
HDAC6-217ENST00000469223 LAMC2Q13753 1193 aa14.83□□□□□ -0.04
HDAC6-217ENST00000469223 DUSP6Q16828 381 aa14.83□□□□□ -0.04
HDAC6-217ENST00000469223 USH1GQ495M9 461 aa14.83□□□□□ -0.04
HDAC6-217ENST00000469223 BTNL9Q6UXG8 535 aa14.83□□□□□ -0.04
HDAC6-217ENST00000469223 S1PR5Q9H228 398 aa14.83□□□□□ -0.04
HDAC6-217ENST00000469223 GPCPD1Q9NPB8 672 aa14.83□□□□□ -0.04
HDAC6-217ENST00000469223 PI15O43692 258 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 PPFIA3O75145 1194 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 APPP05067 770 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 SRGAP2BP0DMP2 458 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 ATP5JP18859 108 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 STXBP2Q15833 593 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 PPP4R3BQ5MIZ7 849 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 ANKRD54Q6NXT1 300 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 SYCE2Q6PIF2 218 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 ITPRIPQ8IWB1 547 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 CMTR2Q8IYT2 770 aaKnown RBP14.82□□□□□ -0.04
HDAC6-217ENST00000469223 DTWD2Q8NBA8 298 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 SEMA4AQ9H3S1 761 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 IL17RBQ9NRM6 502 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 COL20A1Q9P218 1284 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 WDR19Q8NEZ3 1342 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 CACNA1IQ9P0X4 2223 aa14.82□□□□□ -0.04
HDAC6-217ENST00000469223 CNOT1A5YKK6 2376 aaKnown RBP14.81□□□□□ -0.04
HDAC6-217ENST00000469223 FSD2A1L4K1 749 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 GPAA1O43292 621 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 HSDL1Q3SXM5 330 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 HSP90AB4PQ58FF6 505 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 LLGL2Q6P1M3 1020 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 DCLK2Q8N568 766 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 MICAL1Q8TDZ2 1067 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 LINC01599Q8WXQ3 324 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 OSBP2Q969R2 916 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 KIF1BPQ96EK5 621 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 TAAR1Q96RJ0 339 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 CDCA3Q99618 268 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-217ENST00000469223 C16orf70Q9BSU1 422 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 POMKQ9H5K3 350 aa14.81□□□□□ -0.04
HDAC6-217ENST00000469223 TSPY2A6NKD2 308 aa14.8□□□□□ -0.04
HDAC6-217ENST00000469223 EIF2AK2P19525 551 aaKnown RBP14.8□□□□□ -0.04
HDAC6-217ENST00000469223 SYTL5Q8TDW5 730 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-217ENST00000469223 NSUN6Q8TEA1 469 aaKnown RBP14.8□□□□□ -0.04
HDAC6-217ENST00000469223 RUBCNQ92622 972 aa14.8□□□□□ -0.04
HDAC6-217ENST00000469223 SPATA33Q96N06 139 aa14.8□□□□□ -0.04
HDAC6-217ENST00000469223 RNPEPQ9H4A4 650 aa14.8□□□□□ -0.04
HDAC6-217ENST00000469223 CCDC171Q6TFL3 1326 aa14.8□□□□□ -0.04
HDAC6-217ENST00000469223 M0R2C6 588 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 ENPP3O14638 875 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 PPFIA4O75335 1185 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 GGPS1O95749 300 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 IGF2RP11717 2491 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 GATMP50440 423 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 PPARAQ07869 468 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 LPIN1Q14693 890 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 SPEGQ15772 3267 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 FAM26DQ5JW98 314 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 MYSM1Q5VVJ2 828 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 ZKSCAN2Q63HK3 967 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 TBC1D5Q92609 795 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 RMDN3Q96TC7 470 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 PNMA2Q9UL42 364 aa14.79□□□□□ -0.04
HDAC6-217ENST00000469223 SUPT16HQ9Y5B9 1047 aaKnown RBP14.79□□□□□ -0.04
HDAC6-217ENST00000469223 H3BRB1 525 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 CHRNA1P02708 482 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 LGALS2P05162 132 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 SLC3A2P08195 630 aaKnown RBP14.78□□□□□ -0.04
HDAC6-217ENST00000469223 NPR3P17342 541 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 KCNC3Q14003 757 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 PLPP4Q5VZY2 271 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 IFNL3Q8IZI9 196 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 TDRD5Q8NAT2 981 aaKnown RBP14.78□□□□□ -0.04
HDAC6-217ENST00000469223 RIN2Q8WYP3 895 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-217ENST00000469223 APPBP2Q92624 585 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 IWS1Q96ST2 819 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 TUT1Q9H6E5 874 aaKnown RBP14.78□□□□□ -0.04
HDAC6-217ENST00000469223 SETD4Q9NVD3 440 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
HDAC6-217ENST00000469223 C2orf16Q68DN1 1984 aa14.78□□□□□ -0.04
HDAC6-217ENST00000469223 FLNBO75369 2602 aaKnown RBP14.77□□□□□ -0.04
HDAC6-217ENST00000469223 MIA3Q5JRA6 1907 aa14.77□□□□□ -0.04
HDAC6-217ENST00000469223 EIF3JO75822 258 aaKnown RBP14.77□□□□□ -0.05
HDAC6-217ENST00000469223 GNAT2P19087 354 aa14.77□□□□□ -0.05
HDAC6-217ENST00000469223 UBA1P22314 1058 aaKnown RBP14.77□□□□□ -0.05
HDAC6-217ENST00000469223 ERVFC1P60507 584 aa14.77□□□□□ -0.05
HDAC6-217ENST00000469223 CELF3Q5SZQ8 465 aaKnown RBP14.77□□□□□ -0.05
HDAC6-217ENST00000469223 TMEM184AQ6ZMB5 413 aa14.77□□□□□ -0.05
HDAC6-217ENST00000469223 NPAS4Q8IUM7 802 aa14.77□□□□□ -0.05
HDAC6-217ENST00000469223 FTSJ3Q8IY81 847 aaKnown RBP14.77□□□□□ -0.05
HDAC6-217ENST00000469223 RGS22Q8NE09 1264 aa14.77□□□□□ -0.05
HDAC6-217ENST00000469223 LMBR1Q8WVP7 490 aa14.77□□□□□ -0.05
HDAC6-217ENST00000469223 RTP3Q9BQQ7 232 aa14.77□□□□□ -0.05
HDAC6-217ENST00000469223 EHMT1Q9H9B1 1298 aa14.77□□□□□ -0.05
HDAC6-217ENST00000469223 IBSPP21815 317 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-217ENST00000469223 ARHGAP4P98171 946 aa14.76□□□□□ -0.05
HDAC6-217ENST00000469223 UBE3AQ05086 875 aa14.76□□□□□ -0.05
HDAC6-217ENST00000469223 APOBRQ0VD83 1088 aa14.76□□□□□ -0.05
HDAC6-217ENST00000469223 ARHGEF16Q5VV41 709 aa14.76□□□□□ -0.05
HDAC6-217ENST00000469223 TRIM50Q86XT4 487 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms