RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 AP5M1Q9H0R1 490 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 TMEM60Q9H2L4 133 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 KCNMB3Q9NPA1 279 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 PAK6Q9NQU5 681 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-216ENST00000468949 SLC9A2Q9UBY0 812 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 KIAA0100Q14667 2235 aaKnown RBP9.14□□□□□ -0.95
HDAC6-216ENST00000468949 DOCK3Q8IZD9 2030 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 LRRC37A2A6NM11 1700 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 LCTP09848 1927 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 NFASCO94856 1347 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 KDM3AQ9Y4C1 1321 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 WDR64B1ANS9 1081 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 BACH1O14867 736 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 MSCO60682 206 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 FARP2O94887 1054 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-216ENST00000468949 RARBP10826 455 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 CYBAP13498 195 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 SFNP31947 248 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 UBA7P41226 1012 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 PTPAQ15257 358 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 ZRSR1Q15695 479 aaKnown RBP9.13□□□□□ -0.95
HDAC6-216ENST00000468949 LY6KQ17RY6 165 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 CCDC144BQ3MJ40 725 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 MAP3K21Q5TCX8 1036 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 IQSEC1Q6DN90 963 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 ZNF746Q6NUN9 644 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-216ENST00000468949 MIS18BP1Q6P0N0 1132 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 METTL7BQ6UX53 244 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 CYFIP1Q7L576 1253 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 TLK2Q86UE8 772 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 SMAP1Q8IYB5 467 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-216ENST00000468949 SNX29Q8TEQ0 813 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 SLC5A5Q92911 643 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 CALML4Q96GE6 196 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 CCDC34Q96HJ3 373 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 CHAMP1Q96JM3 812 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 SPATA33Q96N06 139 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 MTMR9Q96QG7 549 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 AZI2Q9H6S1 392 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 HMX1Q9NP08 348 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-216ENST00000468949 LRWD1Q9UFC0 647 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 CCDC39Q9UFE4 941 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 RCOR1Q9UKL0 485 aa9.13□□□□□ -0.95
HDAC6-216ENST00000468949 SRPRBQ9Y5M8 271 aaKnown RBP9.13□□□□□ -0.95
HDAC6-216ENST00000468949 MORC2Q9Y6X9 1032 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-216ENST00000468949 CENPFP49454 3210 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 POTEMA6NI47 508 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 TNRC18O15417 2968 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 SEPT4O43236 478 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 ZEB2O60315 1214 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 DKC1O60832 514 aaKnown RBP eCLIP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 PRPF40AO75400 957 aaKnown RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 RGS20O76081 388 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 PSAPP07602 524 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 KCNA2P16389 499 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 CCT6AP40227 531 aaKnown RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 CPT1AP50416 773 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 UBE2HP62256 183 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 CACNB2Q08289 660 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 ITGB3BPQ13352 177 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 PPP2R5CQ13362 524 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 LAMC2Q13753 1193 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 DUSP28Q4G0W2 176 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 PRAMEF19Q5SWL8 479 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 CELF3Q5SZQ8 465 aaKnown RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 PRPF38BQ5VTL8 546 aaKnown RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 FAM160B1Q5W0V3 765 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 TAPT1Q6NXT6 567 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 CLEC17AQ6ZS10 378 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 TMEM87AQ8NBN3 555 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 RDM1Q8NG50 284 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 NEK9Q8TD19 979 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 MRPS27Q92552 414 aaKnown RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 HAS1Q92839 578 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 ATP6V0A1Q93050 837 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 GJA10Q969M2 543 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 DEFB118Q96PH6 123 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 PYM1Q9BRP8 204 aaKnown RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 CSRNP2Q9H175 543 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 UNC45AQ9H3U1 944 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 PDGFCQ9NRA1 345 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 DDX41Q9UJV9 622 aaKnown RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 FBXO2Q9UK22 296 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-216ENST00000468949 PCDHA7Q9UN72 937 aa9.12□□□□□ -0.95
HDAC6-216ENST00000468949 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-216ENST00000468949 RBM47A0AV96 593 aaKnown RBP9.11□□□□□ -0.95
HDAC6-216ENST00000468949 GALR2O43603 387 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-216ENST00000468949 EDIL3O43854 480 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 ATP9AO75110 1047 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 PSMD10O75832 226 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 ARIH2O95376 493 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 SGPL1O95470 568 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 ZNF865P0CJ78 1059 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-216ENST00000468949 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-216ENST00000468949 SMPD1P17405 629 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 ACTR2P61160 394 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 TRIM32Q13049 653 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 PDIA5Q14554 519 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 ADALQ6DHV7 355 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms