RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PPP2R3CQ969Q6 453 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 MYO19Q96H55 970 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 RBM41Q96IZ5 413 aaKnown RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 CHAMP1Q96JM3 812 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 MEGF10Q96KG7 1140 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 IWS1Q96ST2 819 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 GORASP1Q9BQQ3 440 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 TRIM4Q9C037 500 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 BRINP2Q9C0B6 783 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 CENPHQ9H3R5 247 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 HAUS4Q9H6D7 363 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 ZSWIM4Q9H7M6 989 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 CNOT10Q9H9A5 744 aaKnown RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 CAPN10Q9HC96 672 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 ZNHIT6Q9NWK9 470 aaKnown RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 NLRP2Q9NX02 1062 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 TLR7Q9NYK1 1049 aaKnown RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 LARSQ9P2J5 1176 aaKnown RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 RNF14Q9UBS8 474 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 ABCF2Q9UG63 623 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 SUN2Q9UH99 717 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 DDX25Q9UHL0 483 aaKnown RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 DCTN4Q9UJW0 460 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 PALD1Q9ULE6 856 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 RPL26L1Q9UNX3 145 aaKnown RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 ZNF148Q9UQR1 794 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 GRIN2DO15399 1336 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 USP42Q9H9J4 1324 aaKnown RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 OVOS2A0A0G2JMS6 1433 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 OVOS2A0A0J9YW53 1432 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 OVOS2Q6IE36 1432 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 ABCC3O15438 1527 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 FRMPD1Q5SYB0 1578 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 ANKRD26Q9UPS8 1709 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 LOC102724428A0A0B4J2F2 783 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 C5orf60A6NFR6 353 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 MYO1FO00160 1098 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 DIAPH1O60610 1272 aaKnown RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 N4BP1O75113 896 aaKnown RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 SMIM24O75264 130 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 GLRX3O76003 335 aaKnown RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ABL1P00519 1130 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 GHRHP01286 108 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ALADP13716 330 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 PRLRP16471 622 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 TPP2P29144 1249 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ALDH1B1P30837 517 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ALDH3A1P30838 453 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 CASP14P31944 242 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 LSP1P33241 339 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 VAV2P52735 878 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ZNF131P52739 623 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 SIK1P57059 783 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 MAP3K12Q12852 859 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 RESTQ13127 1097 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 PABPC4Q13310 644 aaKnown RBP eCLIP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ZNF268Q14587 947 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 TRIP4Q15650 581 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 CCDC92Q53HC0 331 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 CFAP58Q5T655 872 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 GKAP1Q5VSY0 366 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 NAA35Q5VZE5 725 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 TXNDC11Q6PKC3 985 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 RUFY4Q6ZNE9 571 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ZNF572Q7Z3I7 529 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 TMEM139Q8IV31 216 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 GLYCTKQ8IVS8 523 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 TRIM42Q8IWZ5 723 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 CCDC65Q8IXS2 484 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 CACNA2D3Q8IZS8 1091 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 AGGF1Q8N302 714 aaeCLIP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 LRRC43Q8N309 656 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 SDR16C5Q8N3Y7 309 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 MREGQ8N565 214 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 IL22RA1Q8N6P7 574 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 CAGE1Q8TC20 777 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 PARD3BQ8TEW8 1205 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 SH3TC2Q8TF17 1288 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ANKRD24Q8TF21 1146 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ZNF473Q8WTR7 871 aaKnown RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 DYDC1Q8WWB3 177 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 IRGQQ8WZA9 623 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 RILPL2Q969X0 211 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 PGBD1Q96JS3 809 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 IFT74Q96LB3 600 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 SCLT1Q96NL6 688 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 WDR24Q96S15 920 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 PNKPQ96T60 521 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 TGIF2Q9GZN2 237 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 LSG1Q9H089 658 aaKnown RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ZWILCHQ9H900 591 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 NOD2Q9HC29 1040 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 DMAP1Q9NPF5 467 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 RTEL1Q9NZ71 1219 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 FRRS1LQ9P0K9 344 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 CTTNBP2NLQ9P2B4 639 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 CHPF2Q9P2E5 772 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 TPCN1Q9ULQ1 816 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms