RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 PRPF3O43395 683 aaKnown RBP8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 EFCAB14O75071 495 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 CA3P07451 260 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 IGFBP4P22692 258 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 GNA11P29992 359 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 ARHGAP4P98171 946 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 AP3B2Q13367 1082 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 CEP55Q53EZ4 464 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 JAKMIP3Q5VZ66 844 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 RUFY3Q7L099 469 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 HERC6Q8IVU3 1022 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 CYP2W1Q8TAV3 490 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 PPM1EQ8WY54 764 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 SDF4Q9BRK5 362 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 ZBED2Q9BTP6 218 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 AGXT2Q9BYV1 514 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 SMARCAD1Q9H4L7 1026 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 AZI2Q9H6S1 392 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 C6orf50Q9HD87 102 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 JPH1Q9HDC5 661 aaPredicted RBP8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 TMEM260Q9NX78 707 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 ERAP1Q9NZ08 941 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 CYP46A1Q9Y6A2 500 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 EMSYQ7Z589 1322 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 NRCAMQ92823 1304 aa8.2□□□□□ -1.1
SNRPD3-205ENST00000468770 MEIS1O00470 390 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 TLL1O43897 1013 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 PPFIA3O75145 1194 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 CAND2O75155 1236 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 LGR5O75473 907 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 ARP10275 920 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 MARK3P27448 753 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 PDIA3P30101 505 aaKnown RBP8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 HOXC8P31273 242 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 SREBF1P36956 1147 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 CLK2P49760 499 aaKnown RBP8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 EVCP57679 992 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 WDR5P61964 334 aaKnown RBP8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 CCT2P78371 535 aaKnown RBP8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 ERICH6BQ5W0A0 696 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 MCTP2Q6DN12 878 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 TRAF7Q6Q0C0 670 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 TET1Q8NFU7 2136 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 LMBR1Q8WVP7 490 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 TNPO1Q92973 898 aaKnown RBP8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 PHKBQ93100 1093 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 SLC26A6Q9BXS9 759 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 ZMYND12Q9H0C1 365 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 ZSWIM6Q9HCJ5 1215 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 SLC9A2Q9UBY0 812 aa8.19□□□□□ -1.1
SNRPD3-205ENST00000468770 ESYT2A0FGR8 921 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 CPLX1O14810 134 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 CTSHP09668 335 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 IFNAR1P17181 557 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 STAT5BP51692 787 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 ACTR2P61160 394 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 ADAM17P78536 824 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 DEFB103AP81534 67 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 PPFIA1Q13136 1202 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 ADGRE1Q14246 886 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 MBTPS1Q14703 1052 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 CCDC85BQ15834 202 aaPredicted RBP8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 GRIK4Q16099 956 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 NTRK3Q16288 839 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 PKN1Q16512 942 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 TAF2Q6P1X5 1199 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 TMCO2Q7Z6W1 182 aaPredicted RBP8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 RSPH3Q86UC2 560 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 PLA2G4DQ86XP0 818 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 TRIM22Q8IYM9 498 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 REXO1Q8N1G1 1221 aaKnown RBP8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 CCDC148Q8NFR7 591 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 DBF4BQ8NFT6 615 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 BICD2Q8TD16 824 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 SEPT8Q92599 483 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 RNF26Q9BY78 433 aaPredicted RBP8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 TM6SF1Q9BZW5 370 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 CERS4Q9HA82 394 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 NCOA5Q9HCD5 579 aaKnown RBP8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 AGO4Q9HCK5 861 aaKnown RBP8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 PDRG1Q9NUG6 133 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 NFASCO94856 1347 aa8.18□□□□□ -1.1
SNRPD3-205ENST00000468770 DOCK5Q9H7D0 1870 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 RRN3P2A6NIE6 340 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 FAM86B1E9PN63 330 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 DDX39AO00148 427 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 BACH1O14867 736 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 GJB5O95377 273 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 AMHP03971 560 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 CYP3A4P08684 503 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 FAM86B2P0C5J1 330 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 INSRRP14616 1297 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 NLRP5P59047 1200 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 IGBP1P78318 339 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 TAP1Q03518 808 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 SSRP1Q08945 709 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 ITGB3BPQ13352 177 aaPredicted RBP8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 TOB2Q14106 344 aaPredicted RBP8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 TCTN1Q2MV58 587 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 PLEKHG4Q58EX7 1191 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms