RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ICAM1P05362 532 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 ZNF286BP0CG31 522 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 SLC1A4P43007 532 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 HIC1Q14526 733 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 SPECC1Q5M775 1068 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 ADAM7Q9H2U9 754 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 CYP26B1Q9NR63 512 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 TLR7Q9NYK1 1049 aaKnown RBP13.83□□□□□ -0.2
VPS26A-204ENST00000467852 DUSP12Q9UNI6 340 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 USTQ9Y2C2 406 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 PCDHB12Q9Y5F1 795 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 FRYQ5TBA9 3013 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 MAST4O15021 2626 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 ZZEF1O43149 2961 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 ASH1LQ9NR48 2969 aaKnown RBP13.83□□□□□ -0.2
VPS26A-204ENST00000467852 PNMA6EA0A0J9YXQ4 647 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 SLC30A4O14863 429 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 MBD4O95243 580 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 SHC2P98077 582 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 CTR9Q6PD62 1173 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 RUFY4Q6ZNE9 571 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 RNF207Q6ZRF8 634 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 SEPT14Q6ZU15 432 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 NETO1Q8TDF5 533 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
VPS26A-204ENST00000467852 CASP10Q92851 521 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 MTMR4Q9NYA4 1195 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 CDH22Q9UJ99 828 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 DBR1Q9UK59 544 aaKnown RBP13.82□□□□□ -0.2
VPS26A-204ENST00000467852 ZMIZ1Q9ULJ6 1067 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 KIAA1217Q5T5P2 1943 aa13.82□□□□□ -0.2
VPS26A-204ENST00000467852 IGKV6D-41A0A0C4DH26 115 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 TCRBV5S4A2TA0A5A2 114 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 NFIBO00712 420 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 ALDH1L2Q3SY69 923 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 LRSAM1Q6UWE0 723 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 SLC30A10Q6XR72 485 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 ZNF444Q8N0Y2 327 aaPredicted RBP13.81□□□□□ -0.2
VPS26A-204ENST00000467852 STK11IPQ8N1F8 1099 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 CEP95Q96GE4 821 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 API5Q9BZZ5 524 aaKnown RBP13.81□□□□□ -0.2
VPS26A-204ENST00000467852 WNT16Q9UBV4 365 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 PRR12Q9ULL5 1215 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 CEP295Q9C0D2 2601 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 SPEGQ15772 3267 aa13.81□□□□□ -0.2
VPS26A-204ENST00000467852 MCCP23508 829 aa13.8□□□□□ -0.2
VPS26A-204ENST00000467852 PMLP29590 882 aa13.8□□□□□ -0.2
VPS26A-204ENST00000467852 ERVFC1P60507 584 aa13.8□□□□□ -0.2
VPS26A-204ENST00000467852 LAMC2Q13753 1193 aa13.8□□□□□ -0.2
VPS26A-204ENST00000467852 PAN2Q504Q3 1202 aaKnown RBP13.8□□□□□ -0.2
VPS26A-204ENST00000467852 PPTC7Q8NI37 304 aa13.8□□□□□ -0.2
VPS26A-204ENST00000467852 ATRIPQ8WXE1 791 aa13.8□□□□□ -0.2
VPS26A-204ENST00000467852 DDX1Q92499 740 aaKnown RBP13.8□□□□□ -0.2
VPS26A-204ENST00000467852 EMID1Q96A84 441 aaPredicted RBP13.8□□□□□ -0.2
VPS26A-204ENST00000467852 CHMP4CQ96CF2 233 aa13.8□□□□□ -0.2
VPS26A-204ENST00000467852 ACSF2Q96CM8 615 aaPredicted RBP13.8□□□□□ -0.2
VPS26A-204ENST00000467852 MS4A3Q96HJ5 214 aa13.8□□□□□ -0.2
VPS26A-204ENST00000467852 GMCL1Q96IK5 515 aa13.8□□□□□ -0.2
VPS26A-204ENST00000467852 AAASQ9NRG9 546 aa13.8□□□□□ -0.2
VPS26A-204ENST00000467852 ARPP21Q9UBL0 812 aaPredicted RBP13.8□□□□□ -0.2
VPS26A-204ENST00000467852 TREHO43280 583 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 PPFIA4O75335 1185 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 ZIC2O95409 532 aaPredicted RBP13.79□□□□□ -0.2
VPS26A-204ENST00000467852 EOMESO95936 686 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 GNAI2P04899 355 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 DCNP07585 359 aaKnown RBP13.79□□□□□ -0.2
VPS26A-204ENST00000467852 RPS6P62753 249 aaKnown RBP13.79□□□□□ -0.2
VPS26A-204ENST00000467852 ZNF528Q3MIS6 628 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 ATAT1Q5SQI0 421 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
VPS26A-204ENST00000467852 PLPP4Q5VZY2 271 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 KCTD1Q719H9 257 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 EAF2Q96CJ1 260 aaPredicted RBP13.79□□□□□ -0.2
VPS26A-204ENST00000467852 TBC1D17Q9HA65 648 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 TMEM260Q9NX78 707 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 GMEB2Q9UKD1 530 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 SIT1Q9Y3P8 196 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 SLC4A4Q9Y6R1 1079 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 KAT6AQ92794 2004 aa13.79□□□□□ -0.2
VPS26A-204ENST00000467852 FSCN2O14926 492 aa13.78□□□□□ -0.2
VPS26A-204ENST00000467852 SURF6O75683 361 aaKnown RBP13.78□□□□□ -0.2
VPS26A-204ENST00000467852 STAG3L1P0CL83 205 aa13.78□□□□□ -0.2
VPS26A-204ENST00000467852 TGM1P22735 817 aa13.78□□□□□ -0.2
VPS26A-204ENST00000467852 PLCB2Q00722 1185 aa13.78□□□□□ -0.2
VPS26A-204ENST00000467852 FAM26DQ5JW98 314 aa13.78□□□□□ -0.2
VPS26A-204ENST00000467852 RCSD1Q6JBY9 416 aa13.78□□□□□ -0.2
VPS26A-204ENST00000467852 ZNF287Q9HBT7 754 aa13.78□□□□□ -0.2
VPS26A-204ENST00000467852 NOB1Q9ULX3 412 aaKnown RBP13.78□□□□□ -0.2
VPS26A-204ENST00000467852 SMG5Q9UPR3 1016 aaKnown RBP13.78□□□□□ -0.2
VPS26A-204ENST00000467852 KRBA1A5PL33 1030 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 FGF18O76093 207 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 CFHP08603 1231 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 GHRP10912 638 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 GNAT1P11488 350 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 PSEN1P49768 467 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 PDAP1Q13442 181 aaKnown RBP13.77□□□□□ -0.21
VPS26A-204ENST00000467852 XRRA1Q6P2D8 792 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 ZBED9Q6R2W3 1325 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 NPAS4Q8IUM7 802 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms