RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 HNRNPLLQ8WVV9 542 aaKnown RBP5.89□□□□□ -1.47
RIF1-209ENST00000467762 KLRG1Q96E93 195 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 PAGE5Q96GU1 130 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 CRELD1Q96HD1 420 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 ZCCHC2Q9C0B9 1178 aaKnown RBP5.89□□□□□ -1.47
RIF1-209ENST00000467762 GBP3Q9H0R5 595 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 CABP5Q9NP86 173 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 TOMM22Q9NS69 142 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 TCP11L1Q9NUJ3 509 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 TNKSO95271 1327 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 DOT1LQ8TEK3 1739 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 A0A1B0GUL6 1792 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 LAMB1P07942 1786 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 MAST2Q6P0Q8 1798 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 MYH13Q9UKX3 1938 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 LOC102724428A0A0B4J2F2 783 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 OIP5O43482 229 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 ERLIN1O75477 346 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 TADA3O75528 432 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 URI1O94763 535 aaPredicted RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 LDHCP07864 332 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 BMP4P12644 408 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 SCG2P13521 617 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 NPR3P17342 541 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 ATF4P18848 351 aaPredicted RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 PBX1P40424 430 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 PRPHP41219 470 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 CRKLP46109 303 aaKnown RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 SIK1P57059 783 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 RACK1P63244 317 aaKnown RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 TROAPQ12815 778 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 SERINC3Q13530 473 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 STIM1Q13586 685 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 CUL4BQ13620 913 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 KCNB1Q14721 858 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 NAA30Q147X3 362 aaPredicted RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 TERF2Q15554 542 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 ELF2Q15723 593 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 DDB1Q16531 1140 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 ARSJQ5FYB0 599 aaPredicted RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 RRP12Q5JTH9 1297 aaKnown RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 TTC38Q5R3I4 469 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 ZNF658Q5TYW1 1059 aaPredicted RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 CDKAL1Q5VV42 579 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 CYP26C1Q6V0L0 522 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 CAPN12Q6ZSI9 719 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 TMTC3Q6ZXV5 915 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 RASGRP2Q7LDG7 609 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 HS2ST1Q7LGA3 356 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 TMEM139Q8IV31 216 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 SYNE4Q8N205 404 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 PDILTQ8N807 584 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 ENAHQ8N8S7 591 aaPredicted RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 DAGLBQ8NCG7 672 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 CCDC148Q8NFR7 591 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 NEDD1Q8NHV4 660 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 CCDC12Q8WUD4 166 aaPredicted RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 NUP133Q8WUM0 1156 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 GOLGA1Q92805 767 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 ERCC4Q92889 916 aaPredicted RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 TNFRSF25Q93038 417 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 RELTQ969Z4 430 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 AK8Q96MA6 479 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 AIFM3Q96NN9 605 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 ZIC5Q96T25 663 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 NAP1L4Q99733 375 aaKnown RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 RIOK1Q9BRS2 568 aaKnown RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 NUP58Q9BVL2 599 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 CSRNP2Q9H175 543 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 RNF19AQ9NV58 838 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 ZDHHC3Q9NYG2 299 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 SIRPGQ9P1W8 387 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 ADD3Q9UEY8 706 aaKnown RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 LIMA1Q9UHB6 759 aaKnown RBP5.88□□□□□ -1.47
RIF1-209ENST00000467762 KCNJ14Q9UNX9 436 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 NIP7Q9Y221 180 aaKnown RBP eCLIP5.88□□□□□ -1.47
RIF1-209ENST00000467762 PCDHB6Q9Y5E3 794 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 MRFAP1Q9Y605 127 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 SYNRGQ9UMZ2 1314 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 DUOX1Q9NRD9 1551 aa5.88□□□□□ -1.47
RIF1-209ENST00000467762 A0A1W2PQC6 194 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 CCDC151A5D8V7 595 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 VWA3AA6NCI4 1184 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 MINDY4BA8MYZ0 360 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 hCG_1984214I3L0E3 225 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 ATXN7O15265 892 aaPredicted RBP5.87□□□□□ -1.47
RIF1-209ENST00000467762 SLC26A4O43511 780 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 PRKAB2O43741 272 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 DKK1O94907 266 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 ZRANB2O95218 330 aaKnown RBP eCLIP5.87□□□□□ -1.47
RIF1-209ENST00000467762 SSBP05455 408 aaKnown RBP eCLIP5.87□□□□□ -1.47
RIF1-209ENST00000467762 RXRAP19793 462 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 BMP6P22004 513 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 EEF1GP26641 437 aaKnown RBP5.87□□□□□ -1.47
RIF1-209ENST00000467762 GNA15P30679 374 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 HIBADHP31937 336 aaKnown RBP5.87□□□□□ -1.47
RIF1-209ENST00000467762 NLRP5P59047 1200 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 GNG11P61952 73 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 PKN1Q16512 942 aa5.87□□□□□ -1.47
RIF1-209ENST00000467762 PFKFB3Q16875 520 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms