RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	PTGIS	Q16647	500 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	HSDL1	Q3SXM5	330 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	RILPL1	Q5EBL4	403 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	PCNX4	Q63HM2	1172 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	DIS3L2	Q8IYB7	885 aa	Known RBP	13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	SCLY	Q96I15	445 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	FAM161B	Q96MY7	647 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	SPATA33	Q96N06	139 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	CTAGE1	Q96RT6	745 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	KATNAL1	Q9BW62	490 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	PSTPIP2	Q9H939	334 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	hCG_1642624	A0A1W2PR95	340 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	STXBP3	O00186	592 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	FIBP	O43427	364 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	BMP15	O95972	392 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	IQCF3	P0C7M6	154 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	NCL	P19338	710 aa	Known RBP	13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	DNAJB2	P25686	324 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	RFC2	P35250	354 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	TRAPPC10	P48553	1259 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	CHMP4BP1	P59074	171 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	SEMA3F	Q13275	785 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	BFSP2	Q13515	415 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	MFSD10	Q14728	455 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	GDF6	Q6KF10	455 aa	Predicted RBP	13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	NOSTRIN	Q8IVI9	506 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	C7orf31	Q8N865	590 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	RETREG2	Q8NC44	543 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	AIFM3	Q96NN9	605 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	CDX2	Q99626	313 aa	Predicted RBP	13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	ANP32E	Q9BTT0	268 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	MTIF3	Q9H2K0	278 aa	Known RBP	13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	MLXIP	Q9HAP2	919 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	RTEL1	Q9NZ71	1219 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	VPS54	Q9P1Q0	977 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	GTF2IRD1	Q9UHL9	959 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	NOL7	Q9UMY1	257 aa	Known RBP	13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	PCDHA4	Q9UN74	947 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	NOD1	Q9Y239	953 aa		13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.68	□□□□□ -0.22
CTNS-205	ENST00000467663	SORBS3	O60504	671 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	YEATS4	O95619	227 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	ZNF286B	P0CG31	522 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	NAPA	P54920	295 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	GUCY1B3	Q02153	619 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	RBL2	Q08999	1139 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	NEDD9	Q14511	834 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	KIAA0753	Q2KHM9	967 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	WWC2	Q6AWC2	1192 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	OTOP2	Q7RTS6	562 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	HEATR3	Q7Z4Q2	680 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	FERMT3	Q86UX7	667 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	BLID	Q8IZY5	108 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	CAGE1	Q8TC20	777 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	SENP7	Q9BQF6	1050 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	C16orf70	Q9BSU1	422 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	PBX4	Q9BYU1	374 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	BCAS3	Q9H6U6	928 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	HDAC6	Q9UBN7	1215 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	CEP131	Q9UPN4	1083 aa		13.67	□□□□□ -0.22
CTNS-205	ENST00000467663	GRXCR1	A8MXD5	290 aa		13.66	□□□□□ -0.22
CTNS-205	ENST00000467663	PPFIA3	O75145	1194 aa		13.66	□□□□□ -0.22
CTNS-205	ENST00000467663	METTL7B	Q6UX53	244 aa		13.66	□□□□□ -0.22
CTNS-205	ENST00000467663	NLRX1	Q86UT6	975 aa		13.66	□□□□□ -0.22
CTNS-205	ENST00000467663	CCDC155	Q8N6L0	562 aa		13.66	□□□□□ -0.22
CTNS-205	ENST00000467663	AFAP1L1	Q8TED9	768 aa		13.66	□□□□□ -0.22
CTNS-205	ENST00000467663	TIFA	Q96CG3	184 aa		13.66	□□□□□ -0.22
CTNS-205	ENST00000467663	KCNJ14	Q9UNX9	436 aa		13.66	□□□□□ -0.22
CTNS-205	ENST00000467663	LAMA2	P24043	3122 aa	Known RBP	13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	SMCO2	A6NFE2	343 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	BTBD18	B2RXH4	712 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	MBD3	O95983	291 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	PBX2	P40425	430 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	FOSB	P53539	338 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	DNM1	Q05193	864 aa	Known RBP	13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	PTK7	Q13308	1070 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	ORC2	Q13416	577 aa	Predicted RBP	13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	UBE2S	Q16763	222 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	CYFIP1	Q7L576	1253 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	KRT25	Q7Z3Z0	450 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	DEFB128	Q7Z7B8	93 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	KCNG4	Q8TDN1	519 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	DHX38	Q92620	1227 aa	Known RBP	13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	GPRASP2	Q96D09	838 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	SPATA32	Q96LK8	384 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	GPR20	Q99678	358 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	ZNF576	Q9H609	170 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	RCOR1	Q9UKL0	485 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	PCDHA6	Q9UN73	950 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	PCDHA8	Q9Y5H6	950 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	UBIAD1	Q9Y5Z9	338 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	SLC4A7	Q9Y6M7	1214 aa		13.65	□□□□□ -0.22
CTNS-205	ENST00000467663	SPDYE3	A6NKU9	549 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663		H3BRB1	525 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663		M0R2N6	131 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	NOP56	O00567	594 aa	Known RBP	13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms