RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 SEPT1Q8WYJ6 367 aa29.49■■■□□ 2.31
PDCD4-205ENST00000467574 ZNF577Q9BSK1 485 aa29.49■■■□□ 2.31
PDCD4-205ENST00000467574 BRMS1Q9HCU9 246 aa29.49■■■□□ 2.31
PDCD4-205ENST00000467574 PRKAG2Q9UGJ0 569 aa29.49■■■□□ 2.31
PDCD4-205ENST00000467574 H3BRB1 525 aa29.48■■■□□ 2.31
PDCD4-205ENST00000467574 MSH4O15457 936 aa29.48■■■□□ 2.31
PDCD4-205ENST00000467574 CHMP4BP1P59074 171 aa29.48■■■□□ 2.31
PDCD4-205ENST00000467574 FBXO18Q8NFZ0 1043 aa29.48■■■□□ 2.31
PDCD4-205ENST00000467574 CTAGE1Q96RT6 745 aa29.48■■■□□ 2.31
PDCD4-205ENST00000467574 TUT1Q9H6E5 874 aaKnown RBP29.48■■■□□ 2.31
PDCD4-205ENST00000467574 TANC1Q9C0D5 1861 aa29.48■■■□□ 2.31
PDCD4-205ENST00000467574 MYH9P35579 1960 aaKnown RBP29.48■■■□□ 2.31
PDCD4-205ENST00000467574 ACTR2P61160 394 aa29.47■■■□□ 2.31
PDCD4-205ENST00000467574 UTP14CQ5TAP6 766 aaKnown RBP29.47■■■□□ 2.31
PDCD4-205ENST00000467574 CHRDL2Q6WN34 429 aa29.47■■■□□ 2.31
PDCD4-205ENST00000467574 NEK8Q86SG6 692 aa29.47■■■□□ 2.31
PDCD4-205ENST00000467574 FAM184AQ8NB25 1140 aa29.47■■■□□ 2.31
PDCD4-205ENST00000467574 PCYT2Q99447 389 aa29.47■■■□□ 2.31
PDCD4-205ENST00000467574 HDAC6Q9UBN7 1215 aa29.47■■■□□ 2.31
PDCD4-205ENST00000467574 GTF2IRD1Q9UHL9 959 aa29.47■■■□□ 2.31
PDCD4-205ENST00000467574 LAMA2P24043 3122 aaKnown RBP29.47■■■□□ 2.31
PDCD4-205ENST00000467574 EMSYQ7Z589 1322 aa29.46■■■□□ 2.31
PDCD4-205ENST00000467574 LGR5O75473 907 aa29.46■■■□□ 2.31
PDCD4-205ENST00000467574 MDM2Q00987 491 aaPredicted RBP29.46■■■□□ 2.31
PDCD4-205ENST00000467574 HIC1Q14526 733 aa29.46■■■□□ 2.31
PDCD4-205ENST00000467574 GDF6Q6KF10 455 aaPredicted RBP29.46■■■□□ 2.31
PDCD4-205ENST00000467574 DDX39AO00148 427 aaKnown RBP29.45■■■□□ 2.31
PDCD4-205ENST00000467574 SLC37A4O43826 429 aa29.45■■■□□ 2.31
PDCD4-205ENST00000467574 ATG7O95352 703 aa29.45■■■□□ 2.31
PDCD4-205ENST00000467574 HOXC8P31273 242 aa29.45■■■□□ 2.31
PDCD4-205ENST00000467574 CUL4AQ13619 759 aa29.45■■■□□ 2.31
PDCD4-205ENST00000467574 LETM2Q2VYF4 491 aa29.45■■■□□ 2.31
PDCD4-205ENST00000467574 ETNPPLQ8TBG4 499 aa29.45■■■□□ 2.31
PDCD4-205ENST00000467574 SLC5A5Q92911 643 aa29.45■■■□□ 2.31
PDCD4-205ENST00000467574 TBC1D22BQ9NU19 505 aa29.45■■■□□ 2.31
PDCD4-205ENST00000467574 COLQQ9Y215 455 aaPredicted RBP29.45■■■□□ 2.31
PDCD4-205ENST00000467574 PPP4R3AQ6IN85 833 aa29.44■■■□□ 2.3
PDCD4-205ENST00000467574 C7orf31Q8N865 590 aa29.44■■■□□ 2.3
PDCD4-205ENST00000467574 BADQ92934 168 aa29.44■■■□□ 2.3
PDCD4-205ENST00000467574 GJA10Q969M2 543 aa29.44■■■□□ 2.3
PDCD4-205ENST00000467574 NOC4LQ9BVI4 516 aaKnown RBP29.44■■■□□ 2.3
PDCD4-205ENST00000467574 DDX25Q9UHL0 483 aaKnown RBP29.44■■■□□ 2.3
PDCD4-205ENST00000467574 ZNF215Q9UL58 517 aaPredicted RBP29.44■■■□□ 2.3
PDCD4-205ENST00000467574 TIMP1P01033 207 aa29.43■■■□□ 2.3
PDCD4-205ENST00000467574 CYP2C9P11712 490 aa29.43■■■□□ 2.3
PDCD4-205ENST00000467574 RAG1P15918 1043 aa29.43■■■□□ 2.3
PDCD4-205ENST00000467574 ABHD15Q6UXT9 468 aa29.43■■■□□ 2.3
PDCD4-205ENST00000467574 UMODL1Q5DID0 1318 aa29.43■■■□□ 2.3
PDCD4-205ENST00000467574 SCN5AQ14524 2016 aa29.42■■■□□ 2.3
PDCD4-205ENST00000467574 IGKV6D-21A0A0A0MT36 114 aa29.42■■■□□ 2.3
PDCD4-205ENST00000467574 WNT7AO00755 349 aa29.42■■■□□ 2.3
PDCD4-205ENST00000467574 SUPT20HL2P0C7V6 817 aa29.42■■■□□ 2.3
PDCD4-205ENST00000467574 SMIM10L2AP0DMW4 78 aa29.42■■■□□ 2.3
PDCD4-205ENST00000467574 SMIM10L2BP0DMW5 78 aa29.42■■■□□ 2.3
PDCD4-205ENST00000467574 GCFC2P16383 781 aaKnown RBP29.42■■■□□ 2.3
PDCD4-205ENST00000467574 GJB2P29033 226 aa29.42■■■□□ 2.3
PDCD4-205ENST00000467574 BMP8BP34820 402 aa29.42■■■□□ 2.3
PDCD4-205ENST00000467574 ZNF746Q6NUN9 644 aaPredicted RBP29.42■■■□□ 2.3
PDCD4-205ENST00000467574 RIT2Q99578 217 aa29.42■■■□□ 2.3
PDCD4-205ENST00000467574 SAFBQ15424 915 aaKnown RBP eCLIP29.41■■■□□ 2.3
PDCD4-205ENST00000467574 PTGISQ16647 500 aa29.41■■■□□ 2.3
PDCD4-205ENST00000467574 LBHD1Q9BQE6 289 aaPredicted RBP29.41■■■□□ 2.3
PDCD4-205ENST00000467574 PPP1R12CQ9BZL4 782 aa29.41■■■□□ 2.3
PDCD4-205ENST00000467574 FOXP1Q9H334 677 aaPredicted RBP29.41■■■□□ 2.3
PDCD4-205ENST00000467574 HIPK3Q9H422 1215 aa29.41■■■□□ 2.3
PDCD4-205ENST00000467574 RNPEPQ9H4A4 650 aa29.41■■■□□ 2.3
PDCD4-205ENST00000467574 KCNMB3Q9NPA1 279 aa29.41■■■□□ 2.3
PDCD4-205ENST00000467574 CCNT1O60563 726 aaKnown RBP29.4■■■□□ 2.3
PDCD4-205ENST00000467574 PSMD10O75832 226 aa29.4■■■□□ 2.3
PDCD4-205ENST00000467574 ZNF200P98182 395 aaPredicted RBP29.4■■■□□ 2.3
PDCD4-205ENST00000467574 KRT76Q01546 638 aa29.4■■■□□ 2.3
PDCD4-205ENST00000467574 B3GNT9Q6UX72 402 aa29.4■■■□□ 2.3
PDCD4-205ENST00000467574 DHX38Q92620 1227 aaKnown RBP29.4■■■□□ 2.3
PDCD4-205ENST00000467574 SMARCAD1Q9H4L7 1026 aa29.4■■■□□ 2.3
PDCD4-205ENST00000467574 ERAP1Q9NZ08 941 aa29.4■■■□□ 2.3
PDCD4-205ENST00000467574 KIF28PB7ZC32 967 aa29.39■■■□□ 2.3
PDCD4-205ENST00000467574 MARK3P27448 753 aa29.39■■■□□ 2.3
PDCD4-205ENST00000467574 CYP2C18P33260 490 aa29.39■■■□□ 2.3
PDCD4-205ENST00000467574 LRCH2Q5VUJ6 765 aa29.39■■■□□ 2.3
PDCD4-205ENST00000467574 CCDC60Q8IWA6 550 aaPredicted RBP29.39■■■□□ 2.3
PDCD4-205ENST00000467574 GLG1Q92896 1179 aa29.39■■■□□ 2.3
PDCD4-205ENST00000467574 WNT8AQ9H1J5 351 aa29.39■■■□□ 2.3
PDCD4-205ENST00000467574 KIF3AQ9Y496 699 aa29.39■■■□□ 2.3
PDCD4-205ENST00000467574 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.39■■■□□ 2.3
PDCD4-205ENST00000467574 GAS7O60861 476 aa29.38■■■□□ 2.29
PDCD4-205ENST00000467574 ADAM17P78536 824 aa29.38■■■□□ 2.29
PDCD4-205ENST00000467574 MFSD5Q6N075 450 aa29.38■■■□□ 2.29
PDCD4-205ENST00000467574 PLPPR4Q7Z2D5 763 aa29.38■■■□□ 2.29
PDCD4-205ENST00000467574 POTEDQ86YR6 584 aa29.38■■■□□ 2.29
PDCD4-205ENST00000467574 SMAP1Q8IYB5 467 aaPredicted RBP29.38■■■□□ 2.29
PDCD4-205ENST00000467574 NAP1L4Q99733 375 aaKnown RBP29.38■■■□□ 2.29
PDCD4-205ENST00000467574 SMC3Q9UQE7 1217 aa29.38■■■□□ 2.29
PDCD4-205ENST00000467574 AFAP1L1Q8TED9 768 aa29.37■■■□□ 2.29
PDCD4-205ENST00000467574 HAS1Q92839 578 aa29.37■■■□□ 2.29
PDCD4-205ENST00000467574 WNT8BQ93098 351 aa29.37■■■□□ 2.29
PDCD4-205ENST00000467574 SNX21Q969T3 373 aa29.37■■■□□ 2.29
PDCD4-205ENST00000467574 TEKT3Q9BXF9 490 aa29.37■■■□□ 2.29
PDCD4-205ENST00000467574 UNC45AQ9H3U1 944 aa29.37■■■□□ 2.29
PDCD4-205ENST00000467574 AZI2Q9H6S1 392 aa29.37■■■□□ 2.29
PDCD4-205ENST00000467574 C17orf102A2RUQ5 167 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms