RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 RGS22Q8NE09 1264 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 SYTL5Q8TDW5 730 aaPredicted RBP12□□□□□ -0.49
HDAC3-203ENST00000467533 C16orf70Q9BSU1 422 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 RNPEPQ9H4A4 650 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 TUT1Q9H6E5 874 aaKnown RBP12□□□□□ -0.49
HDAC3-203ENST00000467533 COL20A1Q9P218 1284 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12□□□□□ -0.49
HDAC3-203ENST00000467533 ZFHX4Q86UP3 3567 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 C2CD4DB7Z1M9 353 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 RNF113AO15541 343 aaKnown RBP11.99□□□□□ -0.49
HDAC3-203ENST00000467533 RAB11FIP3O75154 756 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 CTDSPL2Q05D32 466 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 FAM26DQ5JW98 314 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 CELF3Q5SZQ8 465 aaKnown RBP11.99□□□□□ -0.49
HDAC3-203ENST00000467533 MYSM1Q5VVJ2 828 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 ANKRD54Q6NXT1 300 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 LLGL2Q6P1M3 1020 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 CCDC105Q8IYK2 499 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 TBC1D5Q92609 795 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 S1PR5Q9H228 398 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 SEMA4AQ9H3S1 761 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 SETD4Q9NVD3 440 aa11.99□□□□□ -0.49
HDAC3-203ENST00000467533 CACNA1GO43497 2377 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 ABCB11O95342 1321 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 ENPP3O14638 875 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 HMMRO75330 724 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 LGALS2P05162 132 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 ASGR2P07307 311 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 ZFYP08048 801 aaPredicted RBP11.98□□□□□ -0.49
HDAC3-203ENST00000467533 PDHBP11177 359 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 TOP1P11387 765 aaKnown RBP11.98□□□□□ -0.49
HDAC3-203ENST00000467533 AOC1P19801 751 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 ARHGAP4P98171 946 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 SPOUT1Q5T280 376 aaKnown RBP11.98□□□□□ -0.49
HDAC3-203ENST00000467533 CYP2W1Q8TAV3 490 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 TMEM47Q9BQJ4 181 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 MLXIPQ9HAP2 919 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 DLL3Q9NYJ7 618 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 BAHCC1Q9P281 2608 aa11.98□□□□□ -0.49
HDAC3-203ENST00000467533 DOCK5Q9H7D0 1870 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 CHRNA1P02708 482 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 NR3C2P08235 984 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 MYCLP12524 364 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-203ENST00000467533 UBA1P22314 1058 aaKnown RBP11.97□□□□□ -0.49
HDAC3-203ENST00000467533 NOVP48745 357 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 UBE3AQ05086 875 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 ZNF543Q08ER8 600 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 LPIN1Q14693 890 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 SYCE2Q6PIF2 218 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 KCNV1Q6PIU1 500 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 MCF2L2Q86YR7 1114 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 NPAS4Q8IUM7 802 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 DTWD2Q8NBA8 298 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 POMKQ9H5K3 350 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 PXMP2Q9NR77 195 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 TOMM22Q9NS69 142 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 CDH22Q9UJ99 828 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 R4GN57 208 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 MYO10Q9HD67 2058 aa11.97□□□□□ -0.49
HDAC3-203ENST00000467533 KAT6AQ92794 2004 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 ACACBO00763 2458 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 EP300Q09472 2414 aaPredicted RBP11.96□□□□□ -0.49
HDAC3-203ENST00000467533 NOP56O00567 594 aaKnown RBP11.96□□□□□ -0.49
HDAC3-203ENST00000467533 PI15O43692 258 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 STAG3L1P0CL83 205 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 IBSPP21815 317 aaPredicted RBP11.96□□□□□ -0.49
HDAC3-203ENST00000467533 CDC37Q16543 378 aaPredicted RBP11.96□□□□□ -0.49
HDAC3-203ENST00000467533 RSPO4Q2I0M5 234 aaPredicted RBP11.96□□□□□ -0.49
HDAC3-203ENST00000467533 PLPP4Q5VZY2 271 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 CES5AQ6NT32 575 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 TDRD5Q8NAT2 981 aaKnown RBP11.96□□□□□ -0.49
HDAC3-203ENST00000467533 LMBR1Q8WVP7 490 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 LINC01599Q8WXQ3 324 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 RTP3Q9BQQ7 232 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 MAF1Q9H063 256 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 EHMT1Q9H9B1 1298 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 SUPT16HQ9Y5B9 1047 aaKnown RBP11.96□□□□□ -0.49
HDAC3-203ENST00000467533 PCDHB12Q9Y5F1 795 aa11.96□□□□□ -0.49
HDAC3-203ENST00000467533 FNDC1Q4ZHG4 1894 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-203ENST00000467533 TPRP12270 2363 aaKnown RBP11.95□□□□□ -0.5
HDAC3-203ENST00000467533 CFBP00751 764 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 HSPD1P10809 573 aaKnown RBP11.95□□□□□ -0.5
HDAC3-203ENST00000467533 HOXB8P17481 243 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-203ENST00000467533 GATMP50440 423 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 ERVFC1P60507 584 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 MGAT3Q09327 533 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 RRP12Q5JTH9 1297 aaKnown RBP11.95□□□□□ -0.5
HDAC3-203ENST00000467533 PDE12Q6L8Q7 609 aaKnown RBP11.95□□□□□ -0.5
HDAC3-203ENST00000467533 TMEM184AQ6ZMB5 413 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 TSHZ1Q6ZSZ6 1077 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 RSPH3Q86UC2 560 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 TRIM50Q86XT4 487 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 RUBCNQ92622 972 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 NECTIN4Q96NY8 510 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 SEC62Q99442 399 aaKnown RBP11.95□□□□□ -0.5
HDAC3-203ENST00000467533 CPVLQ9H3G5 476 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 ENTPD7Q9NQZ7 604 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 AAASQ9NRG9 546 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 ECHDC1Q9NTX5 307 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms