RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 IPPKQ9H8X2 491 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 PPP4R1LQ9P1A2 415 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 ST6GALNAC2Q9UJ37 374 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 E9PSI1 815 aa7.4□□□□□ -1.22
ATG3-204ENST00000467275 ZNF20P17024 532 aa7.4□□□□□ -1.22
ATG3-204ENST00000467275 GLRBP48167 497 aa7.4□□□□□ -1.22
ATG3-204ENST00000467275 SMAD2Q15796 467 aaKnown RBP7.4□□□□□ -1.22
ATG3-204ENST00000467275 SKIDA1Q1XH10 827 aa7.4□□□□□ -1.22
ATG3-204ENST00000467275 ZFP69BQ9UJL9 534 aa7.4□□□□□ -1.22
ATG3-204ENST00000467275 ASXL2Q76L83 1435 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 ENO2P09104 434 aaPredicted RBP7.39□□□□□ -1.23
ATG3-204ENST00000467275 COL6A1P12109 1028 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 ZC3H6P61129 1189 aaKnown RBP7.39□□□□□ -1.23
ATG3-204ENST00000467275 HABP4Q5JVS0 413 aaKnown RBP7.39□□□□□ -1.23
ATG3-204ENST00000467275 KCTD1Q719H9 257 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 SPATC1Q76KD6 591 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 NUDT10Q8NFP7 164 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 DVL3Q92997 716 aaPredicted RBP7.39□□□□□ -1.23
ATG3-204ENST00000467275 NUDT11Q96G61 164 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 IPO9Q96P70 1041 aaKnown RBP7.39□□□□□ -1.23
ATG3-204ENST00000467275 CDC6Q99741 560 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 C1QTNF3Q9BXJ4 246 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 TMPRSS5Q9H3S3 457 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 IGSF5Q9NSI5 407 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 ARHGAP20Q9P2F6 1191 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 TRAF6Q9Y4K3 522 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 TELO2Q9Y4R8 837 aa7.39□□□□□ -1.23
ATG3-204ENST00000467275 CCDC85CA6NKD9 419 aa7.38□□□□□ -1.23
ATG3-204ENST00000467275 PDPK1O15530 556 aa7.38□□□□□ -1.23
ATG3-204ENST00000467275 CHGBP05060 677 aa7.38□□□□□ -1.23
ATG3-204ENST00000467275 EPHB4P54760 987 aa7.38□□□□□ -1.23
ATG3-204ENST00000467275 PFKPQ01813 784 aa7.38□□□□□ -1.23
ATG3-204ENST00000467275 MTERF2Q49AM1 385 aa7.38□□□□□ -1.23
ATG3-204ENST00000467275 NAALADL2Q58DX5 795 aa7.38□□□□□ -1.23
ATG3-204ENST00000467275 CD276Q5ZPR3 534 aa7.38□□□□□ -1.23
ATG3-204ENST00000467275 MTDHQ86UE4 582 aaKnown RBP7.38□□□□□ -1.23
ATG3-204ENST00000467275 CIR1Q86X95 450 aaPredicted RBP7.38□□□□□ -1.23
ATG3-204ENST00000467275 KRTAP3-1Q9BYR8 98 aa7.38□□□□□ -1.23
ATG3-204ENST00000467275 PDGFDQ9GZP0 370 aaPredicted RBP7.38□□□□□ -1.23
ATG3-204ENST00000467275 ADAM29Q9UKF5 820 aa7.38□□□□□ -1.23
ATG3-204ENST00000467275 AQP7O14520 342 aa7.37□□□□□ -1.23
ATG3-204ENST00000467275 KLHL18O94889 574 aa7.37□□□□□ -1.23
ATG3-204ENST00000467275 EPHA5P54756 1037 aa7.37□□□□□ -1.23
ATG3-204ENST00000467275 SSRP1Q08945 709 aaKnown RBP7.37□□□□□ -1.23
ATG3-204ENST00000467275 SCUBE1Q8IWY4 988 aa7.37□□□□□ -1.23
ATG3-204ENST00000467275 STPG3Q8N7X2 389 aa7.37□□□□□ -1.23
ATG3-204ENST00000467275 KISS1RQ969F8 398 aaPredicted RBP7.37□□□□□ -1.23
ATG3-204ENST00000467275 CD244Q9BZW8 370 aa7.37□□□□□ -1.23
ATG3-204ENST00000467275 PFDN2Q9UHV9 154 aa7.37□□□□□ -1.23
ATG3-204ENST00000467275 MSRB2Q9Y3D2 182 aa7.37□□□□□ -1.23
ATG3-204ENST00000467275 TRBV23-1A0A0A0MS06 115 aa7.36□□□□□ -1.23
ATG3-204ENST00000467275 KNG1P01042 644 aa7.36□□□□□ -1.23
ATG3-204ENST00000467275 PAK1Q13153 545 aa7.36□□□□□ -1.23
ATG3-204ENST00000467275 RASGRF1Q13972 1273 aa7.36□□□□□ -1.23
ATG3-204ENST00000467275 SLFN13Q68D06 897 aa7.36□□□□□ -1.23
ATG3-204ENST00000467275 Q6ZUG5 572 aa7.36□□□□□ -1.23
ATG3-204ENST00000467275 MAMDC2Q7Z304 686 aaPredicted RBP7.36□□□□□ -1.23
ATG3-204ENST00000467275 RALYLQ86SE5 291 aaKnown RBP7.36□□□□□ -1.23
ATG3-204ENST00000467275 PTPRN2Q92932 1015 aa7.36□□□□□ -1.23
ATG3-204ENST00000467275 ZNF839A8K0R7 811 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 C1QTNF3-AMACRE9PGA6 284 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 GPR42O15529 346 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 ATP2B1P20020 1258 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 SUMO1P63165 101 aaKnown RBP7.35□□□□□ -1.23
ATG3-204ENST00000467275 ICAM4Q14773 271 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 EP400NLQ6ZTU2 488 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 NLGN4XQ8N0W4 816 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 PTPN18Q99952 460 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 TANGO6Q9C0B7 1094 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 CCDC113Q9H0I3 377 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 KCND1Q9NSA2 647 aa7.35□□□□□ -1.23
ATG3-204ENST00000467275 H0Y858 1186 aa7.34□□□□□ -1.23
ATG3-204ENST00000467275 ACOT7O00154 380 aa7.34□□□□□ -1.23
ATG3-204ENST00000467275 ADCY3O60266 1144 aa7.34□□□□□ -1.23
ATG3-204ENST00000467275 TNFRSF1AP19438 455 aa7.34□□□□□ -1.23
ATG3-204ENST00000467275 FAM209AQ5JX71 171 aa7.34□□□□□ -1.23
ATG3-204ENST00000467275 BTBD8Q5XKL5 378 aa7.34□□□□□ -1.23
ATG3-204ENST00000467275 ZBTB38Q8NAP3 1195 aaPredicted RBP7.34□□□□□ -1.23
ATG3-204ENST00000467275 TACO1Q9BSH4 297 aaKnown RBP7.34□□□□□ -1.23
ATG3-204ENST00000467275 DEF6Q9H4E7 631 aa7.34□□□□□ -1.23
ATG3-204ENST00000467275 CATSPERZQ9NTU4 200 aa7.34□□□□□ -1.23
ATG3-204ENST00000467275 TCRBV5S4A2TA0A5A2 114 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 MATN3O15232 486 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 GUCY1A3Q02108 690 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 GPR19Q15760 415 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 NBPF6Q5VWK0 638 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 ARHGAP36Q6ZRI8 547 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 GPR155Q7Z3F1 870 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 IFNL2Q8IZJ0 200 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 SH3RF2Q8TEC5 729 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 FBXW5Q969U6 566 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 AJUBAQ96IF1 538 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 NBPF4Q96M43 638 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 CDK5RAP1Q96SZ6 601 aaKnown RBP7.33□□□□□ -1.24
ATG3-204ENST00000467275 KLC2Q9H0B6 622 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 SLC39A2Q9NP94 309 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 RIC8BQ9NVN3 520 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 SRPK3Q9UPE1 567 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 PCDHA8Q9Y5H6 950 aa7.33□□□□□ -1.24
ATG3-204ENST00000467275 NAT1P18440 290 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms