RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 MCM6Q14566 821 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 POTEGQ6S5H5 508 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 MAMDC4Q6UXC1 1216 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 NPLOC4Q8TAT6 608 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 LARP4BQ92615 738 aaKnown RBP14.57□□□□□ -0.08
COL4A1-202ENST00000467182 CDK5RAP3Q96JB5 506 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 C7orf25Q9BPX7 421 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 KATNBL1Q9H079 304 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 BLZF1Q9H2G9 400 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 HOOK1Q9UJC3 728 aaKnown RBP14.57□□□□□ -0.08
COL4A1-202ENST00000467182 DIS3Q9Y2L1 958 aaKnown RBP14.57□□□□□ -0.08
COL4A1-202ENST00000467182 IVNS1ABPQ9Y6Y0 642 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 DOCK3Q8IZD9 2030 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 ASB14A6NK59 587 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 B4DLN1 442 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 BIN1O00499 593 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 ARIH2O95376 493 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 ALDH1A1P00352 501 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 MYL1P05976 194 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 MUTP22033 750 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 NLRP12P59046 1061 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 KRT76Q01546 638 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 CYP4A11Q02928 519 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 MORC3Q14149 939 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 CTTNQ14247 550 aaKnown RBP14.56□□□□□ -0.08
COL4A1-202ENST00000467182 STX1AQ16623 288 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 ANO6Q4KMQ2 910 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 ZNF746Q6NUN9 644 aaPredicted RBP14.56□□□□□ -0.08
COL4A1-202ENST00000467182 CNNM4Q6P4Q7 775 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 SEPT14Q6ZU15 432 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 C11orf57Q6ZUT1 292 aaPredicted RBP14.56□□□□□ -0.08
COL4A1-202ENST00000467182 ARMCX2Q7L311 632 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 MIER3Q7Z3K6 550 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 REM2Q8IYK8 340 aaPredicted RBP14.56□□□□□ -0.08
COL4A1-202ENST00000467182 KCTD17Q8N5Z5 321 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 SMARCE1Q969G3 411 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 MAML3Q96JK9 1138 aa14.56□□□□□ -0.08
COL4A1-202ENST00000467182 MPHOSPH6Q99547 160 aaKnown RBP14.56□□□□□ -0.08
COL4A1-202ENST00000467182 LOXHD1Q8IVV2 1947 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 RBM47A0AV96 593 aaKnown RBP14.55□□□□□ -0.08
COL4A1-202ENST00000467182 GOLGA6L3A6NEY3 463 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 MYMKA6NI61 221 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 IGHA2P01877 340 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 UBA1P22314 1058 aaKnown RBP14.55□□□□□ -0.08
COL4A1-202ENST00000467182 SLC12A3P55017 1021 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 DPCR1Q3MIW9 517 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 TAPT1Q6NXT6 567 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 CCDC62Q6P9F0 684 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 SV2BQ7L1I2 683 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 EEPD1Q7L9B9 569 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 FBXO16Q8IX29 292 aaPredicted RBP14.55□□□□□ -0.08
COL4A1-202ENST00000467182 RDM1Q8NG50 284 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 NEK9Q8TD19 979 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 CCDC34Q96HJ3 373 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 CFHR5Q9BXR6 569 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 TRIM9Q9C026 710 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 DNAJC25Q9H1X3 360 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 GJD2Q9UKL4 321 aa14.55□□□□□ -0.08
COL4A1-202ENST00000467182 SMC2O95347 1197 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 ATG7O95352 703 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 LYPLA2O95372 231 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 EYA4O95677 639 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 SNAI1O95863 264 aaPredicted RBP14.54□□□□□ -0.08
COL4A1-202ENST00000467182 HOXC6P09630 235 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 PLA2G4BP0C869 781 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 TGFB3P10600 412 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 SFNP31947 248 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 VEGFBP49765 207 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 JAK3P52333 1124 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 HTRA3P83110 453 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 MAP2K5Q13163 448 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 UGCGQ16739 394 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 ISM2Q6H9L7 571 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 TRIML1Q8N9V2 468 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 BANK1Q8NDB2 785 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 GSDMAQ96QA5 445 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 LXNQ9BS40 222 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 JPH1Q9HDC5 661 aaPredicted RBP14.54□□□□□ -0.08
COL4A1-202ENST00000467182 PDGFCQ9NRA1 345 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 ANO10Q9NW15 660 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 SLC9A2Q9UBY0 812 aa14.54□□□□□ -0.08
COL4A1-202ENST00000467182 DDX41Q9UJV9 622 aaKnown RBP14.54□□□□□ -0.08
COL4A1-202ENST00000467182 SYNGAP1Q96PV0 1343 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 WDR64B1ANS9 1081 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 ZBTB39O15060 712 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 FARP2O94887 1054 aaPredicted RBP14.53□□□□□ -0.08
COL4A1-202ENST00000467182 RPN1P04843 607 aaKnown RBP14.53□□□□□ -0.08
COL4A1-202ENST00000467182 P4HBP07237 508 aaKnown RBP14.53□□□□□ -0.08
COL4A1-202ENST00000467182 ACTR2P61160 394 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 CAP1Q01518 475 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 KCNB1Q14721 858 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 ARSHQ5FYA8 562 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 TMEM63BQ5T3F8 832 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 ABHD15Q6UXT9 468 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 CYFIP1Q7L576 1253 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 DPP9Q86TI2 863 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 TPH2Q8IWU9 490 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 SMAP1Q8IYB5 467 aaPredicted RBP14.53□□□□□ -0.08
COL4A1-202ENST00000467182 SYT2Q8N9I0 419 aaPredicted RBP14.53□□□□□ -0.08
COL4A1-202ENST00000467182 DNAJC19Q96DA6 116 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms