RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 KIAA1024Q9UPX6 916 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 GDAQ9Y2T3 454 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 UBIAD1Q9Y5Z9 338 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 GOLGB1Q14789 3259 aaKnown RBP10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 A0A1B0GTH6 734 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 BICDL2A1A5D9 508 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 FRMD3A2A2Y4 597 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 SPDYE5A6NIY4 337 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 POTECB2RU33 542 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 MED24O75448 989 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 PLA2G4BP0C869 781 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 CDK11BP21127 795 aaKnown RBP10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 PTGS1P23219 599 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 SLC12A3P55017 1021 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 RPS6P62753 249 aaKnown RBP10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 EPHA7Q15375 998 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 MUM1L1Q5H9M0 696 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 NCAPH2Q6IBW4 605 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 RNF207Q6ZRF8 634 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 APTXQ7Z2E3 356 aaKnown RBP10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 PNMA8AQ86V59 439 aaPredicted RBP10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 ERO1BQ86YB8 467 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 VSTM4Q8IW00 320 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 ANKRD13AQ8IZ07 590 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 SYT2Q8N9I0 419 aaPredicted RBP10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 PROCA1Q8NCQ7 364 aaPredicted RBP10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 CCDC150Q8NCX0 1101 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 NEK9Q8TD19 979 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 EIF2AK1Q9BQI3 630 aaKnown RBP10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 KCNF1Q9H3M0 494 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 TAF1DQ9H5J8 278 aaPredicted RBP10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 JADE2Q9NQC1 790 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 RNF146Q9NTX7 359 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 LIMA1Q9UHB6 759 aaKnown RBP10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 NRBP1Q9UHY1 535 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 FZD1Q9UP38 647 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 KCNH4Q9UQ05 1017 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 DNM3Q9UQ16 869 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 CTNND2Q9UQB3 1225 aa10.64□□□□□ -0.71
APOBEC1-202ENST00000467171 A0A0G2JLL6 359 aaPredicted RBP10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 SOWAHBA6NEL2 793 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 IRF6O14896 467 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 RGS20O76081 388 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 ARP10275 920 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 ITGB5P18084 799 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 CYP11B2P19099 503 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 CCNE1P24864 410 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 STAT3P40763 770 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 STX17P56962 302 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 STK4Q13043 487 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 NR1I3Q14994 352 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 TMEM132BQ14DG7 1078 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 GPR162Q16538 588 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 LRCH2Q5VUJ6 765 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 CENPPQ6IPU0 288 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 TTI2Q6NXR4 508 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 LBX2Q6XYB7 198 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 PRRT2Q7Z6L0 340 aaPredicted RBP10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 LRRC8AQ8IWT6 810 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 GUF1Q8N442 669 aaKnown RBP10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 MB21D1Q8N884 522 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 KIAA0895Q8NCT3 520 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 CHST13Q8NET6 341 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 ANKRD20A12PQ8NF67 263 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 KIAA1524Q8TCG1 905 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 P2RX5Q93086 422 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 WNK4Q96J92 1243 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 ZFRQ96KR1 1074 aaKnown RBP10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 NAP1L5Q96NT1 182 aaPredicted RBP10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 PDCD2LQ9BRP1 358 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 ZNF577Q9BSK1 485 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 TEKT3Q9BXF9 490 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 THAP9Q9H5L6 903 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 INTS13Q9NVM9 706 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 DOCK1Q14185 1865 aa10.63□□□□□ -0.71
APOBEC1-202ENST00000467171 SBF1O95248 1867 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 E9PMD0 336 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 IPO5O00410 1097 aaKnown RBP10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 EML1O00423 815 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 MAFGO15525 162 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 GAS7O60861 476 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 STAM2O75886 525 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 SLITRK3O94933 977 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 EYA4O95677 639 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 EEF1GP26641 437 aaKnown RBP10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 PPIL2Q13356 520 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 PRKG1Q13976 671 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 PGM5Q15124 567 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 TPD52L1Q16890 204 aaPredicted RBP10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 FILIP1LQ4L180 1135 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 LDLRAD1Q5T700 205 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 SNRNP48Q6IEG0 339 aaKnown RBP10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 SLC30A10Q6XR72 485 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 NYAP1Q6ZVC0 841 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 ARMC9Q7Z3E5 817 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 TMC6Q7Z403 805 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 FILIP1Q7Z7B0 1213 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 VSIG10LQ86VR7 867 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms