RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 SLC39A2Q9NP94 309 aa19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 LAMB1P07942 1786 aa19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 SLC37A4O43826 429 aa19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 UBE2SQ16763 222 aa19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 SHROOM1Q2M3G4 852 aaPredicted RBP19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 ZNF572Q7Z3I7 529 aaPredicted RBP19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 REXO1Q8N1G1 1221 aaKnown RBP19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 MB21D1Q8N884 522 aa19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 GIMAP8Q8ND71 665 aaPredicted RBP19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 CCHCR1Q8TD31 782 aa19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 AGPAT5Q9NUQ2 364 aa19.81■□□□□ 0.76
SNAPC3-205ENST00000467062 GMNCA6NCL1 334 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 POTEMA6NI47 508 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 FAM196BA6NMK8 535 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 ENO4A6NNW6 628 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 IDEP14735 1019 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 GNA11P29992 359 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 IQCKQ8N0W5 287 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 BORCS6Q96GS4 357 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 ATP6V1G3Q96LB4 118 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 DUSP9Q99956 384 aaKnown RBP19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 HINFPQ9BQA5 517 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 NUDT12Q9BQG2 462 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 KCNQ5Q9NR82 932 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 STIM2Q9P246 746 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 PSMA7O14818 248 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 RHOBTB3O94955 611 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 TRIM37O94972 964 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 VAV2P52735 878 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 CACNB3P54284 484 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 SPAG1Q07617 926 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 TSR1Q2NL82 804 aaKnown RBP19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 GALNT17Q6IS24 598 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 TTI2Q6NXR4 508 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 MIS18BP1Q6P0N0 1132 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 KRT25Q7Z3Z0 450 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 CERKQ8TCT0 537 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 HDAC7Q8WUI4 952 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 TBC1D31Q96DN5 1066 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 MTMR4Q9NYA4 1195 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 CORO1CQ9ULV4 474 aaPredicted RBP19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 C15orf41Q9Y2V0 281 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 PCDHAC2Q9Y5I4 1007 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 COL24A1Q17RW2 1714 aa19.8■□□□□ 0.76
SNAPC3-205ENST00000467062 EDIL3O43854 480 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 GHRP10912 638 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 MYO1EQ12965 1108 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 SLC5A9Q2M3M2 681 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 C15orf52Q6ZUT6 534 aaKnown RBP19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 ARMC9Q7Z3E5 817 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 THOC1Q96FV9 657 aaKnown RBP19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 PPANQ9NQ55 473 aaKnown RBP19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 BAIAP2L1Q9UHR4 511 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 BBOX1O75936 387 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 RAB27AP51159 221 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 ELF3P78545 371 aaPredicted RBP19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 EZH2Q15910 746 aaKnown RBP19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 KCTD1Q719H9 257 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 TRIM58Q8NG06 486 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 CCDC43Q96MW1 224 aaKnown RBP19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 LZTS2Q9BRK4 669 aa19.79■□□□□ 0.76
SNAPC3-205ENST00000467062 ZNF233A6NK53 670 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 SMNDC1O75940 238 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 HERVK_113P62684 666 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 CACNA2D3Q8IZS8 1091 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 PAIP2Q9BPZ3 127 aaKnown RBP19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 TUBGCP2Q9BSJ2 902 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 TMX4Q9H1E5 349 aaPredicted RBP19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 EXOC1Q9NV70 894 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 ZBTB12Q9Y330 459 aaPredicted RBP19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 OPLAHO14841 1288 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 LIN7AO14910 233 aaPredicted RBP19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 CAND2O75155 1236 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 TNNI2P48788 182 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 ZFPM1Q8IX07 1006 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 GLIS3Q8NEA6 775 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 STAMBPL1Q96FJ0 436 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 PCMTD1Q96MG8 357 aaPredicted RBP19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 OSBPL9Q96SU4 736 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 KDM4CQ9H3R0 1056 aa19.78■□□□□ 0.76
SNAPC3-205ENST00000467062 AHCYL1O43865 530 aa19.77■□□□□ 0.76
SNAPC3-205ENST00000467062 PLCG2P16885 1265 aa19.77■□□□□ 0.76
SNAPC3-205ENST00000467062 NFIAQ12857 509 aa19.77■□□□□ 0.76
SNAPC3-205ENST00000467062 ITGB3BPQ13352 177 aaPredicted RBP19.77■□□□□ 0.76
SNAPC3-205ENST00000467062 SPATA4Q8NEY3 305 aa19.77■□□□□ 0.76
SNAPC3-205ENST00000467062 ZNF507Q8TCN5 953 aa19.77■□□□□ 0.76
SNAPC3-205ENST00000467062 USP40Q9NVE5 1235 aa19.77■□□□□ 0.76
SNAPC3-205ENST00000467062 LUC7L2Q9Y383 392 aaKnown RBP19.77■□□□□ 0.76
SNAPC3-205ENST00000467062 AFF2P51816 1311 aa19.77■□□□□ 0.76
SNAPC3-205ENST00000467062 LGALS16A8MUM7 142 aa19.77■□□□□ 0.75
SNAPC3-205ENST00000467062 POLRMTO00411 1230 aaKnown RBP19.77■□□□□ 0.75
SNAPC3-205ENST00000467062 PPP1R11O60927 126 aaPredicted RBP19.77■□□□□ 0.75
SNAPC3-205ENST00000467062 WDR59Q6PJI9 974 aa19.77■□□□□ 0.75
SNAPC3-205ENST00000467062 CREG2Q8IUH2 290 aa19.77■□□□□ 0.75
SNAPC3-205ENST00000467062 KIAA0895Q8NCT3 520 aa19.77■□□□□ 0.75
SNAPC3-205ENST00000467062 MAGEC2Q9UBF1 373 aaPredicted RBP19.77■□□□□ 0.75
SNAPC3-205ENST00000467062 LRWD1Q9UFC0 647 aa19.77■□□□□ 0.75
SNAPC3-205ENST00000467062 GAKO14976 1311 aa19.76■□□□□ 0.75
SNAPC3-205ENST00000467062 SBF2Q86WG5 1849 aa19.76■□□□□ 0.75
SNAPC3-205ENST00000467062 RASSF10A6NK89 507 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms