RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
NPHP4-205ENST00000466897 GPR20Q99678 358 aa17.12■□□□□ 0.33
NPHP4-205ENST00000466897 UNC45AQ9H3U1 944 aa17.12■□□□□ 0.33
NPHP4-205ENST00000466897 BCAS3Q9H6U6 928 aa17.12■□□□□ 0.33
NPHP4-205ENST00000466897 TFIP11Q9UBB9 837 aaKnown RBP17.12■□□□□ 0.33
NPHP4-205ENST00000466897 RCOR1Q9UKL0 485 aa17.12■□□□□ 0.33
NPHP4-205ENST00000466897 OGDHLQ9ULD0 1010 aa17.12■□□□□ 0.33
NPHP4-205ENST00000466897 SRPRBQ9Y5M8 271 aaKnown RBP17.12■□□□□ 0.33
NPHP4-205ENST00000466897 IGKV6D-21A0A0A0MT36 114 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
NPHP4-205ENST00000466897 SPTLC2O15270 562 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 KPNA6O60684 536 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 PPFIA4O75335 1185 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 CAPN15O75808 1086 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 MMP3P08254 477 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 GJA8P48165 433 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 ACTR2P61160 394 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 DGKDQ16760 1214 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 RNF180Q86T96 592 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 ARRDC4Q8NCT1 418 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 AFG1LQ8WV93 481 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 TNPO1Q92973 898 aaKnown RBP17.11■□□□□ 0.33
NPHP4-205ENST00000466897 GJA10Q969M2 543 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 AK8Q96MA6 479 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 DEFB118Q96PH6 123 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 TSEN34Q9BSV6 310 aaKnown RBP17.11■□□□□ 0.33
NPHP4-205ENST00000466897 FBXO2Q9UK22 296 aaPredicted RBP17.11■□□□□ 0.33
NPHP4-205ENST00000466897 PCDHA10Q9Y5I2 948 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 EMSYQ7Z589 1322 aa17.11■□□□□ 0.33
NPHP4-205ENST00000466897 ARID2Q68CP9 1835 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 GSTTP1A0A1W2PQM5 241 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 ZEB2O60315 1214 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 SGPL1O95470 568 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 PGK1P00558 417 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 C6orf222P0C671 652 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-205ENST00000466897 PTGS1P23219 599 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 LONP1P36776 959 aaKnown RBP17.1■□□□□ 0.33
NPHP4-205ENST00000466897 TECP42680 631 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 CEBPZQ03701 1054 aaKnown RBP17.1■□□□□ 0.33
NPHP4-205ENST00000466897 IL17AQ16552 155 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 FOXD4L6Q3SYB3 417 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-205ENST00000466897 CCSAPQ6IQ19 270 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-205ENST00000466897 MIS18BP1Q6P0N0 1132 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 ABHD15Q6UXT9 468 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 FOXD4L3Q6VB84 417 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-205ENST00000466897 KRI1Q8N9T8 703 aaKnown RBP17.1■□□□□ 0.33
NPHP4-205ENST00000466897 PCSK9Q8NBP7 692 aaKnown RBP17.1■□□□□ 0.33
NPHP4-205ENST00000466897 NEK9Q8TD19 979 aa17.1■□□□□ 0.33
NPHP4-205ENST00000466897 LEO1Q8WVC0 666 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-205ENST00000466897 MOXD2PA6NHM9 499 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 DDX39AO00148 427 aaKnown RBP17.09■□□□□ 0.33
NPHP4-205ENST00000466897 DNM1LO00429 736 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 SLC26A4O43511 780 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 LGR5O75473 907 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 PSAPP07602 524 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 SUPT20HL2P0C7V6 817 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 LRRC41Q15345 812 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 EPHA7Q15375 998 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 MIER3Q7Z3K6 550 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 ZNF579Q8NAF0 562 aaKnown RBP17.09■□□□□ 0.33
NPHP4-205ENST00000466897 ANKLE1Q8NAG6 615 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 AFAP1L1Q8TED9 768 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
NPHP4-205ENST00000466897 SPATA32Q96LK8 384 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 UIMC1Q96RL1 719 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 DISC1Q9NRI5 854 aa17.09■□□□□ 0.33
NPHP4-205ENST00000466897 KAT6AQ92794 2004 aa17.08■□□□□ 0.33
NPHP4-205ENST00000466897 IGSF9BQ9UPX0 1349 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 VWA3AA6NCI4 1184 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 MYADML2A6NDP7 307 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 POTEMA6NI47 508 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 EML1O00423 815 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
NPHP4-205ENST00000466897 MUTP22033 750 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 TCF7P36402 384 aaPredicted RBP17.08■□□□□ 0.32
NPHP4-205ENST00000466897 SLC26A2P50443 739 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 GNASQ5JWF2 1037 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 HAUS3Q68CZ6 603 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 ERMNQ8TAM6 284 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 TMEM106CQ9BVX2 250 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 LRWD1Q9UFC0 647 aa17.08■□□□□ 0.32
NPHP4-205ENST00000466897 KIAA0100Q14667 2235 aaKnown RBP17.07■□□□□ 0.32
NPHP4-205ENST00000466897 CHMP2AO43633 222 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 CUTAO60888 179 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 CABYRO75952 493 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 F2P00734 622 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 MYCP01106 439 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-205ENST00000466897 LGALS2P05162 132 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 MARCKSP29966 332 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-205ENST00000466897 PURAQ00577 322 aaKnown RBP17.07■□□□□ 0.32
NPHP4-205ENST00000466897 SP4Q02446 784 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 CSPP1Q1MSJ5 1256 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 NCAPH2Q6IBW4 605 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 PLPPR4Q7Z2D5 763 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 KCTD17Q8N5Z5 321 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 HSD17B14Q9BPX1 270 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 C16orf70Q9BSU1 422 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 TELO2Q9Y4R8 837 aa17.07■□□□□ 0.32
NPHP4-205ENST00000466897 SAMM50Q9Y512 469 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms