RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 LAMA3Q16787 3333 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 LARGE1O95461 756 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 NR3C2P08235 984 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 IFNAR1P17181 557 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 EIF2AK2P19525 551 aaKnown RBP11.12□□□□□ -0.63
C9orf135-202ENST00000466872 MRPS9P82933 396 aaKnown RBP11.12□□□□□ -0.63
C9orf135-202ENST00000466872 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 ST3GAL1Q11201 340 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 SEMA3FQ13275 785 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 IQSEC1Q6DN90 963 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 USP17L6PQ6QN14 398 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 VSIG10LQ86VR7 867 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 ARRDC4Q8NCT1 418 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 NSUN6Q8TEA1 469 aaKnown RBP11.12□□□□□ -0.63
C9orf135-202ENST00000466872 COPS5Q92905 334 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 ZNF274Q96GC6 653 aaPredicted RBP11.12□□□□□ -0.63
C9orf135-202ENST00000466872 IWS1Q96ST2 819 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 TSEN34Q9BSV6 310 aaKnown RBP11.12□□□□□ -0.63
C9orf135-202ENST00000466872 NCOA5Q9HCD5 579 aaKnown RBP11.12□□□□□ -0.63
C9orf135-202ENST00000466872 Q9Y3F1 56 aa11.12□□□□□ -0.63
C9orf135-202ENST00000466872 A0A1W2PQ45 241 aaPredicted RBP11.11□□□□□ -0.63
C9orf135-202ENST00000466872 A0A1W2PQY0 241 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 GCOM1H8Y6P7 765 aaPredicted RBP11.11□□□□□ -0.63
C9orf135-202ENST00000466872 PRPF3O43395 683 aaKnown RBP11.11□□□□□ -0.63
C9orf135-202ENST00000466872 GPR37L1O60883 481 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 POLR2MP0CAP2 368 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 TRAF1Q13077 416 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 PFKFB3Q16875 520 aaPredicted RBP11.11□□□□□ -0.63
C9orf135-202ENST00000466872 SLC39A5Q6ZMH5 540 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 SYNE3Q6ZMZ3 975 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 TLK2Q86UE8 772 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 CRYGNQ8WXF5 182 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 HTATIP2Q9BUP3 242 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 PDRG1Q9NUG6 133 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 BARHL2Q9NY43 387 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 TPCN1Q9ULQ1 816 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 WDR81Q562E7 1941 aa11.11□□□□□ -0.63
C9orf135-202ENST00000466872 GRIN2DO15399 1336 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 LAMA2P24043 3122 aaKnown RBP11.1□□□□□ -0.63
C9orf135-202ENST00000466872 H0YGN5 161 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 hCG_1984214I3L0E3 225 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 EDIL3O43854 480 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
C9orf135-202ENST00000466872 ACLYP53396 1101 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 AK2P54819 239 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 CCT2P78371 535 aaKnown RBP11.1□□□□□ -0.63
C9orf135-202ENST00000466872 BEX3Q00994 111 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 PTK2Q05397 1052 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 ARHGAP1Q07960 439 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 SCRN1Q12765 414 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 NPY5RQ15761 445 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 KCNA10Q16322 511 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 UBE2SQ16763 222 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 RNF180Q86T96 592 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 ZNF713Q8N859 430 aaPredicted RBP11.1□□□□□ -0.63
C9orf135-202ENST00000466872 SLC43A3Q8NBI5 491 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 SCFD2Q8WU76 684 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 PHKBQ93100 1093 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 INPP4AQ96PE3 977 aaPredicted RBP11.1□□□□□ -0.63
C9orf135-202ENST00000466872 ARHGAP9Q9BRR9 750 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 RNF26Q9BY78 433 aaPredicted RBP11.1□□□□□ -0.63
C9orf135-202ENST00000466872 WDR11Q9BZH6 1224 aa11.1□□□□□ -0.63
C9orf135-202ENST00000466872 SENP6Q9GZR1 1112 aaPredicted RBP11.1□□□□□ -0.63
C9orf135-202ENST00000466872 SEC63Q9UGP8 760 aaKnown RBP11.1□□□□□ -0.63
C9orf135-202ENST00000466872 DDX41Q9UJV9 622 aaKnown RBP11.1□□□□□ -0.63
C9orf135-202ENST00000466872 ESYT2A0FGR8 921 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 A6NJR5 290 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 KBTBD13C9JR72 458 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 PFKFB2O60825 505 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 EIF3JO75822 258 aaKnown RBP11.09□□□□□ -0.63
C9orf135-202ENST00000466872 ASGR1P07306 291 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 HOXD8P13378 290 aaPredicted RBP11.09□□□□□ -0.63
C9orf135-202ENST00000466872 SCG2P13521 617 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 CDK7P50613 346 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 RTP1P59025 263 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 SP2Q02086 613 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 STXBP2Q15833 593 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 ARHGEF16Q5VV41 709 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 HEATR3Q7Z4Q2 680 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 FCHSD1Q86WN1 690 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 TEX2Q8IWB9 1127 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 FERMT2Q96AC1 680 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 BCAS3Q9H6U6 928 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 RIC8AQ9NPQ8 531 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 TRIOBPQ9H2D6 2365 aa11.09□□□□□ -0.63
C9orf135-202ENST00000466872 TANC1Q9C0D5 1861 aa11.08□□□□□ -0.64
C9orf135-202ENST00000466872 CCDC196A0A1B0GTZ2 297 aa11.08□□□□□ -0.64
C9orf135-202ENST00000466872 NKRFO15226 690 aaKnown RBP eCLIP11.08□□□□□ -0.64
C9orf135-202ENST00000466872 DYNC1LI2O43237 492 aaPredicted RBP11.08□□□□□ -0.64
C9orf135-202ENST00000466872 PPFIA3O75145 1194 aa11.08□□□□□ -0.64
C9orf135-202ENST00000466872 C6orf222P0C671 652 aaPredicted RBP11.08□□□□□ -0.64
C9orf135-202ENST00000466872 ICAM3P32942 547 aa11.08□□□□□ -0.64
C9orf135-202ENST00000466872 SMCPP49901 116 aaPredicted RBP11.08□□□□□ -0.64
C9orf135-202ENST00000466872 FSCN1Q16658 493 aaKnown RBP11.08□□□□□ -0.64
C9orf135-202ENST00000466872 ME3Q16798 604 aa11.08□□□□□ -0.64
C9orf135-202ENST00000466872 LY6KQ17RY6 165 aa11.08□□□□□ -0.64
C9orf135-202ENST00000466872 TRIM60Q495X7 471 aa11.08□□□□□ -0.64
C9orf135-202ENST00000466872 PCNX4Q63HM2 1172 aa11.08□□□□□ -0.64
C9orf135-202ENST00000466872 C7orf61Q8IZ16 206 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms