RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 TRMT10BQ6PF06 316 aaKnown RBP4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 DVL3Q92997 716 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 GPR20Q99678 358 aa4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 ST6GALNAC2Q9UJ37 374 aa4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 R3HCC1Q9Y3T6 440 aaKnown RBP4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 ZNF839A8K0R7 811 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 PATE3B3GLJ2 98 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 CNOT4O95628 575 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 CHGBP05060 677 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 CSF2RBP32927 897 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 NFATC3Q12968 1075 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 SMAD2Q15796 467 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 SKIDA1Q1XH10 827 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 NSMFQ6X4W1 530 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 KCTD1Q719H9 257 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 SPATC1Q76KD6 591 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 KBTBD2Q8IY47 623 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 IFNL3Q8IZI9 196 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 LRRC47Q8N1G4 583 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 WWC2-AS2Q96NR7 200 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 IPPKQ9H8X2 491 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 FTSJ1Q9UET6 329 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 ZFP69BQ9UJL9 534 aa4.89□□□□□ -1.63
GTF3C3-209ENST00000466862 IL18BPO95998 194 aa4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 GNAT1P11488 350 aa4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 COL6A2P12110 1019 aa4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 IFRD2Q12894 506 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 RASGRF1Q13972 1273 aa4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 GLB1LQ6UWU2 654 aa4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 Q6ZUG5 572 aa4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 AJUBAQ96IF1 538 aa4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 PTPN18Q99952 460 aa4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 SPATA9Q9BWV2 254 aa4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 TSC22D4Q9Y3Q8 395 aa4.88□□□□□ -1.63
GTF3C3-209ENST00000466862 PPP2CBP62714 309 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 PPP2CAP67775 309 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 SPIRE1Q08AE8 756 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 FOXB2Q5VYV0 432 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 SLFN13Q68D06 897 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 REXO1L1PQ8IX06 675 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 KCNJ15Q99712 375 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 CD244Q9BZW8 370 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 KATNBL1Q9H079 304 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 DSEQ9UL01 958 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 SRPK3Q9UPE1 567 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 TRAF6Q9Y4K3 522 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 SLC4A7Q9Y6M7 1214 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 ZNF536O15090 1300 aa4.87□□□□□ -1.63
GTF3C3-209ENST00000466862 FAM47E-STBD1D6RA91 191 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 ARVCFO00192 962 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 PDPK1O15530 556 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 CKMP06732 381 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 ZXDAP98168 799 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 PFKPQ01813 784 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 SERINC3Q13530 473 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 ARHGEF18Q6ZSZ5 1173 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 MAMDC2Q7Z304 686 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 RALYLQ86SE5 291 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 CIR1Q86X95 450 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 Q8N1X5 172 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 STPG3Q8N7X2 389 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 EXOC2Q96KP1 924 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 KLC2Q9H0B6 622 aa4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 BARX1Q9HBU1 254 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-209ENST00000466862 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 MAN2B1O00754 1011 aa4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 AKAP8O43823 692 aaKnown RBP4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 DIAPH1O60610 1272 aaKnown RBP4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 AMY2AP04746 511 aa4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 AMY2BP19961 511 aa4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 RBM25P49756 843 aaKnown RBP4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 SELENOPP49908 381 aa4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 ZC3H6P61129 1189 aaKnown RBP4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 RASA3Q14644 834 aa4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 FIGNQ5HY92 759 aa4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 GPR155Q7Z3F1 870 aa4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 ARHGAP20Q9P2F6 1191 aa4.85□□□□□ -1.63
GTF3C3-209ENST00000466862 NPEPPSL1A6NEC2 478 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 FAM90A27PA6NNH2 459 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 ZNF561-AS1K7EIQ3 104 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 ENO2P09104 434 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 ZNF888P0CJ79 500 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 GLRBP48167 497 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 SUMO1P63165 101 aaKnown RBP4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 DBPQ10586 325 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 NAALADL2Q58DX5 795 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 NBPF6Q5VWK0 638 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 CRIP3Q6Q6R5 217 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 SPRED1Q7Z699 444 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 CKAP2LQ8IYA6 745 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 ZBTB38Q8NAP3 1195 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 CHST13Q8NET6 341 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 PCDH19Q8TAB3 1148 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 NBPF4Q96M43 638 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 ALG1Q9BT22 464 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 TRIM55Q9BYV6 548 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 CCDC113Q9H0I3 377 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 SEC61A2Q9H9S3 476 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 CBLCQ9ULV8 474 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms