RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 MAFGO15525 162 aa20.03■□□□□ 0.8
COL7A1-206ENST00000466591 FOSP01100 380 aaPredicted RBP20.03■□□□□ 0.8
COL7A1-206ENST00000466591 METAP2P50579 478 aaKnown RBP eCLIP20.03■□□□□ 0.8
COL7A1-206ENST00000466591 HIC1Q14526 733 aa20.03■□□□□ 0.8
COL7A1-206ENST00000466591 ZNF713Q8N859 430 aaPredicted RBP20.03■□□□□ 0.8
COL7A1-206ENST00000466591 LMBR1Q8WVP7 490 aa20.03■□□□□ 0.8
COL7A1-206ENST00000466591 JAKMIP1Q96N16 626 aaKnown RBP20.03■□□□□ 0.8
COL7A1-206ENST00000466591 ASB2Q96Q27 587 aa20.03■□□□□ 0.8
COL7A1-206ENST00000466591 SMARCAD1Q9H4L7 1026 aa20.03■□□□□ 0.8
COL7A1-206ENST00000466591 JPH1Q9HDC5 661 aaPredicted RBP20.03■□□□□ 0.8
COL7A1-206ENST00000466591 JADE2Q9NQC1 790 aa20.03■□□□□ 0.8
COL7A1-206ENST00000466591 TCEAL9Q9UHQ7 104 aa20.03■□□□□ 0.8
COL7A1-206ENST00000466591 LCHNA4D1U4 455 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 SMCO2A6NFE2 343 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 UPP2O95045 317 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 NEFLP07196 543 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 KCNA2P16389 499 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 ITGB5P18084 799 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 IGBP1P78318 339 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 COL9A3Q14050 684 aaPredicted RBP20.02■□□□□ 0.8
COL7A1-206ENST00000466591 GPNMBQ14956 572 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 TAF2Q6P1X5 1199 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 BLOC1S2Q6QNY1 142 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 PGBD1Q96JS3 809 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 TGS1Q96RS0 853 aaKnown RBP20.02■□□□□ 0.8
COL7A1-206ENST00000466591 YME1L1Q96TA2 773 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 RIC8AQ9NPQ8 531 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 BRPF3Q9ULD4 1205 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 TRPC6Q9Y210 931 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 INSL6Q9Y581 213 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 UBIAD1Q9Y5Z9 338 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 MTCH2Q9Y6C9 303 aa20.02■□□□□ 0.8
COL7A1-206ENST00000466591 DOCK5Q9H7D0 1870 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 ATP9AO75110 1047 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 MBTPS1Q14703 1052 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 GRIK4Q16099 956 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 ADCK5Q3MIX3 580 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 PLEKHG4Q58EX7 1191 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.01■□□□□ 0.79
COL7A1-206ENST00000466591 RASEFQ8IZ41 740 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 CCDC12Q8WUD4 166 aaPredicted RBP20.01■□□□□ 0.79
COL7A1-206ENST00000466591 APBB2Q92870 758 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 ANO3Q9BYT9 981 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 SLC9A2Q9UBY0 812 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 TUBE1Q9UJT0 475 aa20.01■□□□□ 0.79
COL7A1-206ENST00000466591 TET1Q8NFU7 2136 aa20■□□□□ 0.79
COL7A1-206ENST00000466591 M0QZ92 97 aa20■□□□□ 0.79
COL7A1-206ENST00000466591 REC8O95072 547 aa20■□□□□ 0.79
COL7A1-206ENST00000466591 EXOSC10Q01780 885 aaKnown RBP20■□□□□ 0.79
COL7A1-206ENST00000466591 GRB10Q13322 594 aa20■□□□□ 0.79
COL7A1-206ENST00000466591 TRAF7Q6Q0C0 670 aa20■□□□□ 0.79
COL7A1-206ENST00000466591 Q6ZUG5 572 aa20■□□□□ 0.79
COL7A1-206ENST00000466591 ADAMTS19Q8TE59 1207 aa20■□□□□ 0.79
COL7A1-206ENST00000466591 GDPD5Q8WTR4 605 aa20■□□□□ 0.79
COL7A1-206ENST00000466591 MXRA8Q9BRK3 442 aa20■□□□□ 0.79
COL7A1-206ENST00000466591 IFIH1Q9BYX4 1025 aaKnown RBP20■□□□□ 0.79
COL7A1-206ENST00000466591 KCNH7Q9NS40 1196 aa20■□□□□ 0.79
COL7A1-206ENST00000466591 EYSQ5T1H1 3165 aa19.99■□□□□ 0.79
COL7A1-206ENST00000466591 EPOPA6NHQ4 379 aa19.99■□□□□ 0.79
COL7A1-206ENST00000466591 TNFRSF10AO00220 468 aa19.99■□□□□ 0.79
COL7A1-206ENST00000466591 APOBRQ0VD83 1088 aa19.99■□□□□ 0.79
COL7A1-206ENST00000466591 AP3B2Q13367 1082 aa19.99■□□□□ 0.79
COL7A1-206ENST00000466591 TSGA10IPQ3SY00 556 aa19.99■□□□□ 0.79
COL7A1-206ENST00000466591 TEX2Q8IWB9 1127 aa19.99■□□□□ 0.79
COL7A1-206ENST00000466591 BARHL2Q9NY43 387 aa19.99■□□□□ 0.79
COL7A1-206ENST00000466591 TELO2Q9Y4R8 837 aa19.99■□□□□ 0.79
COL7A1-206ENST00000466591 A0A0C4DFX4 3053 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 STXBP3O00186 592 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 BACH1O14867 736 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 ARHGEF15O94989 841 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 RPLP2P05387 115 aaKnown RBP19.98■□□□□ 0.79
COL7A1-206ENST00000466591 PSMA5P28066 241 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 HOXC8P31273 242 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 RCAN1P53805 252 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 TCTN1Q2MV58 587 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 CEP55Q53EZ4 464 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 KRT40Q6A162 431 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 FBXO22Q8NEZ5 403 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 BRF1Q92994 677 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 UHRF1Q96T88 793 aaPredicted RBP19.98■□□□□ 0.79
COL7A1-206ENST00000466591 FAM49AQ9H0Q0 323 aaPredicted RBP19.98■□□□□ 0.79
COL7A1-206ENST00000466591 C6orf50Q9HD87 102 aa19.98■□□□□ 0.79
COL7A1-206ENST00000466591 GSTTP1A0A1W2PQM5 241 aa19.97■□□□□ 0.79
COL7A1-206ENST00000466591 LINC01553A4QN01 128 aa19.97■□□□□ 0.79
COL7A1-206ENST00000466591 RRN3P2A6NIE6 340 aa19.97■□□□□ 0.79
COL7A1-206ENST00000466591 DDX39AO00148 427 aaKnown RBP19.97■□□□□ 0.79
COL7A1-206ENST00000466591 GHRP10912 638 aa19.97■□□□□ 0.79
COL7A1-206ENST00000466591 CPA1P15085 419 aa19.97■□□□□ 0.79
COL7A1-206ENST00000466591 JAKMIP3Q5VZ66 844 aa19.97■□□□□ 0.79
COL7A1-206ENST00000466591 TMEM260Q9NX78 707 aa19.97■□□□□ 0.79
COL7A1-206ENST00000466591 COG5Q9UP83 839 aa19.97■□□□□ 0.79
COL7A1-206ENST00000466591 SCG2P13521 617 aa19.96■□□□□ 0.79
COL7A1-206ENST00000466591 POU3F3P20264 500 aaPredicted RBP19.96■□□□□ 0.79
COL7A1-206ENST00000466591 CDC27P30260 824 aa19.96■□□□□ 0.79
COL7A1-206ENST00000466591 ACTR2P61160 394 aa19.96■□□□□ 0.79
COL7A1-206ENST00000466591 TFF2Q03403 129 aa19.96■□□□□ 0.79
COL7A1-206ENST00000466591 IER5Q5VY09 327 aa19.96■□□□□ 0.79
COL7A1-206ENST00000466591 FAM160B1Q5W0V3 765 aa19.96■□□□□ 0.79
COL7A1-206ENST00000466591 MCTP2Q6DN12 878 aa19.96■□□□□ 0.79
COL7A1-206ENST00000466591 DNAJB3Q8WWF6 145 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms