RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 MED24O75448 989 aa20.82■□□□□ 0.92
CAPN3-209ENST00000466222 STAT6P42226 847 aa20.82■□□□□ 0.92
CAPN3-209ENST00000466222 KRT79Q5XKE5 535 aa20.82■□□□□ 0.92
CAPN3-209ENST00000466222 NIPA1Q7RTP0 329 aa20.82■□□□□ 0.92
CAPN3-209ENST00000466222 IQUBQ8NA54 791 aa20.82■□□□□ 0.92
CAPN3-209ENST00000466222 ANKRD7Q92527 254 aa20.82■□□□□ 0.92
CAPN3-209ENST00000466222 PAGE5Q96GU1 130 aa20.82■□□□□ 0.92
CAPN3-209ENST00000466222 IWS1Q96ST2 819 aa20.82■□□□□ 0.92
CAPN3-209ENST00000466222 MAF1Q9H063 256 aa20.82■□□□□ 0.92
CAPN3-209ENST00000466222 RGL1Q9NZL6 768 aa20.82■□□□□ 0.92
CAPN3-209ENST00000466222 KIF2AO00139 706 aaPredicted RBP20.81■□□□□ 0.92
CAPN3-209ENST00000466222 BIN1O00499 593 aa20.81■□□□□ 0.92
CAPN3-209ENST00000466222 IKBKBO14920 756 aa20.81■□□□□ 0.92
CAPN3-209ENST00000466222 EDNRBP24530 442 aa20.81■□□□□ 0.92
CAPN3-209ENST00000466222 SP2Q02086 613 aa20.81■□□□□ 0.92
CAPN3-209ENST00000466222 CYP4A11Q02928 519 aa20.81■□□□□ 0.92
CAPN3-209ENST00000466222 STXBP2Q15833 593 aa20.81■□□□□ 0.92
CAPN3-209ENST00000466222 SEPT14Q6ZU15 432 aa20.81■□□□□ 0.92
CAPN3-209ENST00000466222 CCDC150Q8NCX0 1101 aa20.81■□□□□ 0.92
CAPN3-209ENST00000466222 C16orf45Q96MC5 204 aaPredicted RBP20.81■□□□□ 0.92
CAPN3-209ENST00000466222 POTEB3A0JP26 581 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 CCT6AP40227 531 aaKnown RBP20.8■□□□□ 0.92
CAPN3-209ENST00000466222 NOGQ13253 232 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 XRRA1Q6P2D8 792 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 POTEBQ6S5H4 581 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 CATSPER3Q86XQ3 398 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 BLZF1Q9H2G9 400 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 ZCCHC17Q9NP64 241 aaKnown RBP20.8■□□□□ 0.92
CAPN3-209ENST00000466222 ADD3Q9UEY8 706 aaKnown RBP20.8■□□□□ 0.92
CAPN3-209ENST00000466222 SPATA31C1P0DKV0 1188 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 SKILP12757 684 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 KCNJ6P48051 423 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 POSTNQ15063 836 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 B3GNT9Q6UX72 402 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 SH3RF1Q7Z6J0 888 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 ELOA2Q8IYF1 753 aaPredicted RBP20.8■□□□□ 0.92
CAPN3-209ENST00000466222 ZFYVE28Q9HCC9 887 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 TUBE1Q9UJT0 475 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 IVNS1ABPQ9Y6Y0 642 aa20.8■□□□□ 0.92
CAPN3-209ENST00000466222 EIF3JO75822 258 aaKnown RBP20.79■□□□□ 0.92
CAPN3-209ENST00000466222 CCZ1BP86790 482 aa20.79■□□□□ 0.92
CAPN3-209ENST00000466222 CCZ1P86791 482 aaPredicted RBP20.79■□□□□ 0.92
CAPN3-209ENST00000466222 PDE4DQ08499 809 aa20.79■□□□□ 0.92
CAPN3-209ENST00000466222 PPP2R5CQ13362 524 aa20.79■□□□□ 0.92
CAPN3-209ENST00000466222 ZNF792Q3KQV3 632 aa20.79■□□□□ 0.92
CAPN3-209ENST00000466222 DPCR1Q3MIW9 517 aa20.79■□□□□ 0.92
CAPN3-209ENST00000466222 EIF2AK1Q9BQI3 630 aaKnown RBP20.79■□□□□ 0.92
CAPN3-209ENST00000466222 BLOC1S4Q9NUP1 217 aa20.79■□□□□ 0.92
CAPN3-209ENST00000466222 KIAA1024Q9UPX6 916 aa20.79■□□□□ 0.92
CAPN3-209ENST00000466222 PCDHA5Q9Y5H7 936 aa20.79■□□□□ 0.92
CAPN3-209ENST00000466222 POTEFA5A3E0 1075 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 NRDCO43847 1150 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 CTGFP29279 349 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 TMEM63BQ5T3F8 832 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 POTEGQ6S5H5 508 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 PLEKHH3Q7Z736 793 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 CCDC112Q8NEF3 446 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 GPRASP2Q96D09 838 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 CALML4Q96GE6 196 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 RIT2Q99578 217 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 TEKT3Q9BXF9 490 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 SPATA31C2B4DYI2 1134 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 CCNE2O96020 404 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 KCNA2P16389 499 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 PSMC6P62333 389 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 CUL4BQ13620 913 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 CTTNQ14247 550 aaKnown RBP20.78■□□□□ 0.92
CAPN3-209ENST00000466222 GRB14Q14449 540 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 CEP135Q66GS9 1140 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 NLRX1Q86UT6 975 aa20.78■□□□□ 0.92
CAPN3-209ENST00000466222 WRAP73Q9P2S5 460 aaPredicted RBP20.78■□□□□ 0.92
CAPN3-209ENST00000466222 E9PMD0 336 aa20.77■□□□□ 0.92
CAPN3-209ENST00000466222 CA12O43570 354 aa20.77■□□□□ 0.92
CAPN3-209ENST00000466222 STRNO43815 780 aa20.77■□□□□ 0.92
CAPN3-209ENST00000466222 MAPK4P31152 587 aa20.77■□□□□ 0.92
CAPN3-209ENST00000466222 SP4Q02446 784 aa20.77■□□□□ 0.92
CAPN3-209ENST00000466222 TMEM119Q4V9L6 283 aa20.77■□□□□ 0.92
CAPN3-209ENST00000466222 NYAP1Q6ZVC0 841 aa20.77■□□□□ 0.92
CAPN3-209ENST00000466222 FILIP1Q7Z7B0 1213 aa20.77■□□□□ 0.92
CAPN3-209ENST00000466222 FBXO16Q8IX29 292 aaPredicted RBP20.77■□□□□ 0.92
CAPN3-209ENST00000466222 DYDC2Q96IM9 177 aa20.77■□□□□ 0.92
CAPN3-209ENST00000466222 CDK5RAP3Q96JB5 506 aa20.77■□□□□ 0.92
CAPN3-209ENST00000466222 ZBTB39O15060 712 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 SLITRK3O94933 977 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 TUBB4AP04350 444 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 VEGFBP49765 207 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 MCM6Q14566 821 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 PTPN14Q15678 1187 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 DPP9Q86TI2 863 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 PDCL2Q8N4E4 241 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 HSD17B14Q9BPX1 270 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 TBC1D8O95759 1140 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 GNPTABQ3T906 1256 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 ABRAQ8N0Z2 381 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 NPLOC4Q8TAT6 608 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 ARHGAP39Q9C0H5 1083 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 PDGFCQ9NRA1 345 aa20.76■□□□□ 0.91
CAPN3-209ENST00000466222 HTTP42858 3142 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 CBFA2T2O43439 604 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 STAM2O75886 525 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms