RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CCDC140Q96MF4 163 aa6.41□□□□□ -1.38
LRCH3-211ENST00000466054 CRAMP1Q96RY5 1269 aa6.41□□□□□ -1.38
LRCH3-211ENST00000466054 MEGF9Q9H1U4 602 aa6.41□□□□□ -1.38
LRCH3-211ENST00000466054 A0A087X1B8 175 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 KCNH1O95259 989 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 CAPNS1P04632 268 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 PLS3P13797 630 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 INHBCP55103 352 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 PPP2R2AP63151 447 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 LSM12Q3MHD2 195 aaKnown RBP6.4□□□□□ -1.38
LRCH3-211ENST00000466054 GTF2IRD2BQ6EKJ0 949 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 GTF2IRD2Q86UP8 949 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 IFNL2Q8IZJ0 200 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 THAP3Q8WTV1 239 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-211ENST00000466054 ZNF503Q96F45 646 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 GNRHR2Q96P88 292 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 LRRC37BQ96QE4 947 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 LMF1Q96S06 567 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 AARSD1Q9BTE6 412 aaKnown RBP6.4□□□□□ -1.38
LRCH3-211ENST00000466054 NKX2-4Q9H2Z4 354 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 CYP26B1Q9NR63 512 aa6.4□□□□□ -1.38
LRCH3-211ENST00000466054 ZFR2Q9UPR6 939 aaKnown RBP6.4□□□□□ -1.38
LRCH3-211ENST00000466054 KDM2BQ8NHM5 1336 aa6.4□□□□□ -1.39
LRCH3-211ENST00000466054 TRAV20A0A0B4J274 112 aa6.39□□□□□ -1.39
LRCH3-211ENST00000466054 DIAPH1O60610 1272 aaKnown RBP6.39□□□□□ -1.39
LRCH3-211ENST00000466054 HOXC12P31275 282 aa6.39□□□□□ -1.39
LRCH3-211ENST00000466054 AMER2Q8N7J2 671 aa6.39□□□□□ -1.39
LRCH3-211ENST00000466054 ZBTB38Q8NAP3 1195 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-211ENST00000466054 NEU4Q8WWR8 484 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-211ENST00000466054 ZCCHC14Q8WYQ9 949 aaKnown RBP6.39□□□□□ -1.39
LRCH3-211ENST00000466054 DPF3Q92784 378 aa6.39□□□□□ -1.39
LRCH3-211ENST00000466054 ZG16BQ96DA0 208 aa6.39□□□□□ -1.39
LRCH3-211ENST00000466054 TRMT2BQ96GJ1 504 aaKnown RBP6.39□□□□□ -1.39
LRCH3-211ENST00000466054 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
LRCH3-211ENST00000466054 COA3Q9Y2R0 106 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-211ENST00000466054 ADCY3O60266 1144 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 CPP00450 1065 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 SCG5P05408 212 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 FGFR1P11362 822 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 CHRNA2Q15822 529 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 C2orf27AQ580R0 203 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 MBLAC2Q68D91 279 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 LILRB2Q8N423 598 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 BTN2A2Q8WVV5 523 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 MMP19Q99542 508 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 SEC61A2Q9H9S3 476 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 ARHGEF4Q9NR80 690 aa6.38□□□□□ -1.39
LRCH3-211ENST00000466054 CCDC163A0A0D9SF12 145 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 FOXS1O43638 330 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 FPR2P25090 351 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 RPL11P62913 178 aaKnown RBP6.37□□□□□ -1.39
LRCH3-211ENST00000466054 SCRN1Q12765 414 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 ZNF568Q3ZCX4 644 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 IGFL4Q6B9Z1 124 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 TCTN3Q6NUS6 607 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 CEP68Q76N32 757 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 RIOX2Q8IUF8 465 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 ZSWIM2Q8NEG5 633 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 COPS5Q92905 334 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 LGR4Q9BXB1 951 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 GPRC5CQ9NQ84 441 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 DTLQ9NZJ0 730 aa6.37□□□□□ -1.39
LRCH3-211ENST00000466054 TMA7Q9Y2S6 64 aaKnown RBP6.37□□□□□ -1.39
LRCH3-211ENST00000466054 TLDC2A0PJX2 215 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 TBX1O43435 398 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 NARSO43776 548 aaKnown RBP6.36□□□□□ -1.39
LRCH3-211ENST00000466054 MYO1BO43795 1136 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 FAM153BP0C7A2 387 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 LMO1P25800 156 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 GFRA1P56159 465 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 MAP4K2Q12851 820 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 GIMAP6Q6P9H5 292 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 TMC5Q6UXY8 1006 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 KCTD13Q8WZ19 329 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 RNPC3Q96LT9 517 aaKnown RBP6.36□□□□□ -1.39
LRCH3-211ENST00000466054 IPO9Q96P70 1041 aaKnown RBP6.36□□□□□ -1.39
LRCH3-211ENST00000466054 ADAM29Q9UKF5 820 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 ZNF652Q9Y2D9 606 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 TBX22Q9Y458 520 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 PCDHB4Q9Y5E5 795 aa6.36□□□□□ -1.39
LRCH3-211ENST00000466054 TIMM13Q9Y5L4 95 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-211ENST00000466054 HGSO14964 777 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-211ENST00000466054 SNRPB2P08579 225 aaKnown RBP6.35□□□□□ -1.39
LRCH3-211ENST00000466054 COMTP21964 271 aa6.35□□□□□ -1.39
LRCH3-211ENST00000466054 TEPPQ6URK8 271 aa6.35□□□□□ -1.39
LRCH3-211ENST00000466054 SCUBE1Q8IWY4 988 aa6.35□□□□□ -1.39
LRCH3-211ENST00000466054 SH3TC2Q8TF17 1288 aa6.35□□□□□ -1.39
LRCH3-211ENST00000466054 EXTL1Q92935 676 aa6.35□□□□□ -1.39
LRCH3-211ENST00000466054 CDC6Q99741 560 aa6.35□□□□□ -1.39
LRCH3-211ENST00000466054 CNOT4O95628 575 aaKnown RBP6.34□□□□□ -1.39
LRCH3-211ENST00000466054 ADH4P08319 380 aa6.34□□□□□ -1.39
LRCH3-211ENST00000466054 PABPC1P11940 636 aaKnown RBP6.34□□□□□ -1.39
LRCH3-211ENST00000466054 GRIA2P42262 883 aa6.34□□□□□ -1.39
LRCH3-211ENST00000466054 E4F1Q66K89 784 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-211ENST00000466054 IQCEQ6IPM2 695 aa6.34□□□□□ -1.39
LRCH3-211ENST00000466054 NSMFQ6X4W1 530 aa6.34□□□□□ -1.39
LRCH3-211ENST00000466054 TAX1BP1Q86VP1 789 aa6.34□□□□□ -1.39
LRCH3-211ENST00000466054 JAZF1Q86VZ6 243 aa6.34□□□□□ -1.39
LRCH3-211ENST00000466054 TMEM169Q96HH4 297 aa6.34□□□□□ -1.39
LRCH3-211ENST00000466054 IER2Q9BTL4 223 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms