RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 SENP7Q9BQF6 1050 aa12.82□□□□□ -0.36
TMCO1-204ENST00000465705 TSEN34Q9BSV6 310 aaKnown RBP12.82□□□□□ -0.36
TMCO1-204ENST00000465705 PHF24Q9UPV7 400 aa12.82□□□□□ -0.36
TMCO1-204ENST00000465705 NOP56O00567 594 aaKnown RBP12.81□□□□□ -0.36
TMCO1-204ENST00000465705 TDP2O95551 362 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 ASGR1P07306 291 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 MMP3P08254 477 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 ARP10275 920 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 GCFC2P16383 781 aaKnown RBP12.81□□□□□ -0.36
TMCO1-204ENST00000465705 KCNA2P16389 499 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 ACLYP53396 1101 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 MYSM1Q5VVJ2 828 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 MCTP1Q6DN14 999 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 CCSAPQ6IQ19 270 aaPredicted RBP12.81□□□□□ -0.36
TMCO1-204ENST00000465705 MOXD1Q6UVY6 613 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 CYFIP1Q7L576 1253 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 UBE2Q1Q7Z7E8 422 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 NOSTRINQ8IVI9 506 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 GLT1D1Q96MS3 346 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 SPATA33Q96N06 139 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 SDF4Q9BRK5 362 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 ZNF577Q9BSK1 485 aa12.81□□□□□ -0.36
TMCO1-204ENST00000465705 AGO4Q9HCK5 861 aaKnown RBP12.81□□□□□ -0.36
TMCO1-204ENST00000465705 DDX25Q9UHL0 483 aaKnown RBP12.81□□□□□ -0.36
TMCO1-204ENST00000465705 A0A1W2PQ45 241 aaPredicted RBP12.8□□□□□ -0.36
TMCO1-204ENST00000465705 A0A1W2PQY0 241 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 VPS37CA5D8V6 355 aaPredicted RBP12.8□□□□□ -0.36
TMCO1-204ENST00000465705 A6NJR5 290 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 IPO5O00410 1097 aaKnown RBP12.8□□□□□ -0.36
TMCO1-204ENST00000465705 CCNT1O60563 726 aaKnown RBP12.8□□□□□ -0.36
TMCO1-204ENST00000465705 ATP9AO75110 1047 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 MYL3P08590 195 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 COL6A1P12109 1028 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 SP4Q02446 784 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 BECN1Q14457 450 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 DGKDQ16760 1214 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 HSDL1Q3SXM5 330 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 CXCL17Q6UXB2 119 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 FERMT2Q96AC1 680 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 SENP6Q9GZR1 1112 aaPredicted RBP12.8□□□□□ -0.36
TMCO1-204ENST00000465705 JPH1Q9HDC5 661 aaPredicted RBP12.8□□□□□ -0.36
TMCO1-204ENST00000465705 POLR3EQ9NVU0 708 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 TCEAL9Q9UHQ7 104 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 NFASCO94856 1347 aa12.8□□□□□ -0.36
TMCO1-204ENST00000465705 CYP3A7-CYP3A51PA0A087WV96 503 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 KIF28PB7ZC32 967 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 EDIL3O43854 480 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 KPNA6O60684 536 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 CABYRO75952 493 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 CYP3A7P24462 503 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMCO1-204ENST00000465705 ITGB3BPQ13352 177 aaPredicted RBP12.79□□□□□ -0.36
TMCO1-204ENST00000465705 Q4G0T1 1027 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 PPP4R3AQ6IN85 833 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 LENG9Q96B70 501 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 HTATIP2Q9BUP3 242 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 BCAS3Q9H6U6 928 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 STARD7Q9NQZ5 370 aa12.79□□□□□ -0.36
TMCO1-204ENST00000465705 NOL7Q9UMY1 257 aaKnown RBP12.79□□□□□ -0.36
TMCO1-204ENST00000465705 DOCK5Q9H7D0 1870 aa12.78□□□□□ -0.36
TMCO1-204ENST00000465705 DDX39AO00148 427 aaKnown RBP12.78□□□□□ -0.36
TMCO1-204ENST00000465705 MSH4O15457 936 aa12.78□□□□□ -0.36
TMCO1-204ENST00000465705 SLC37A4O43826 429 aa12.78□□□□□ -0.36
TMCO1-204ENST00000465705 ATP2B1P20020 1258 aa12.78□□□□□ -0.36
TMCO1-204ENST00000465705 PURAQ00577 322 aaKnown RBP12.78□□□□□ -0.36
TMCO1-204ENST00000465705 MBOAT7Q96N66 472 aa12.78□□□□□ -0.36
TMCO1-204ENST00000465705 UIMC1Q96RL1 719 aa12.78□□□□□ -0.36
TMCO1-204ENST00000465705 GPR20Q99678 358 aa12.78□□□□□ -0.36
TMCO1-204ENST00000465705 MTG1Q9BT17 334 aaPredicted RBP12.78□□□□□ -0.36
TMCO1-204ENST00000465705 TBC1D22BQ9NU19 505 aa12.78□□□□□ -0.36
TMCO1-204ENST00000465705 SLC9A2Q9UBY0 812 aa12.78□□□□□ -0.36
TMCO1-204ENST00000465705 MARCH6O60337 910 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 NEMFO60524 1076 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 GAS7O60861 476 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 PPFIA4O75335 1185 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 ZNF286BP0CG31 522 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 HOXD8P13378 290 aaPredicted RBP12.77□□□□□ -0.37
TMCO1-204ENST00000465705 SYT1P21579 422 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 TRAPPC10P48553 1259 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 TTC38Q5R3I4 469 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 LRCH2Q5VUJ6 765 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 RIT2Q99578 217 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 KATNAL1Q9BW62 490 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 ELP1O95163 1332 aa12.77□□□□□ -0.37
TMCO1-204ENST00000465705 A0A0U1RQG5 324 aaPredicted RBP12.76□□□□□ -0.37
TMCO1-204ENST00000465705 TBX3O15119 743 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 F2P00734 622 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 LGALS2P05162 132 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 MCM7P33993 719 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 TCF7P36402 384 aaPredicted RBP12.76□□□□□ -0.37
TMCO1-204ENST00000465705 CHMP4BP1P59074 171 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 ACTR2P61160 394 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 PSMC6P62333 389 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 KRT76Q01546 638 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 SLC39A5Q6ZMH5 540 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 ETNPPLQ8TBG4 499 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 SEPT1Q8WYJ6 367 aa12.76□□□□□ -0.37
TMCO1-204ENST00000465705 SLC5A5Q92911 643 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms