RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 CTC1Q2NKJ3 1217 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 FAM26DQ5JW98 314 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 USP17L6PQ6QN14 398 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 HFE2Q6ZVN8 426 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 ADHFE1Q8IWW8 467 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 INPP4AQ96PE3 977 aaPredicted RBP11.93□□□□□ -0.5
GPNMB-206ENST00000465673 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 CNNM2Q9H8M5 875 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 ALG13Q9NP73 1137 aaKnown RBP11.93□□□□□ -0.5
GPNMB-206ENST00000465673 MUTYHQ9UIF7 546 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 ATG2AQ2TAZ0 1938 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 NLRC5Q86WI3 1866 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 C5orf42Q9H799 3197 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 PNMA6FA0A0J9YX94 578 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 ENPP3O14638 875 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 ATP9AO75110 1047 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 CAND2O75155 1236 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 TBX10O75333 385 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 GNAT1P11488 350 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 MARK3P27448 753 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 NT5C2P49902 561 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 NUCB1Q02818 461 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 CAMK1Q14012 370 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 NEDD9Q14511 834 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 LPIN1Q14693 890 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 GNPTABQ3T906 1256 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 EHMT1Q9H9B1 1298 aa11.92□□□□□ -0.5
GPNMB-206ENST00000465673 FRMPD4Q14CM0 1322 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 WDFY4Q6ZS81 3184 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 C5orf67F2Z3F1 127 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 IFIT3O14879 490 aaKnown RBP11.91□□□□□ -0.5
GPNMB-206ENST00000465673 FIBPO43427 364 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 MBTPS2O43462 519 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 DNAJB1P25685 340 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 PTH1RQ03431 593 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 MGAT3Q09327 533 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 TROAPQ12815 778 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 SMAD2Q15796 467 aaKnown RBP11.91□□□□□ -0.5
GPNMB-206ENST00000465673 SAMD3Q8N6K7 520 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 DNAJB3Q8WWF6 145 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 LINC01599Q8WXQ3 324 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 APBB2Q92870 758 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 PHOX2BQ99453 314 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 AGO3Q9H9G7 860 aaKnown RBP11.91□□□□□ -0.5
GPNMB-206ENST00000465673 RC3H2Q9HBD1 1191 aaKnown RBP11.91□□□□□ -0.5
GPNMB-206ENST00000465673 PKD2L1Q9P0L9 805 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 PRKAG3Q9UGI9 489 aa11.91□□□□□ -0.5
GPNMB-206ENST00000465673 ADGRA3Q8IWK6 1321 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 RB1P06400 928 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 CYP21A2P08686 494 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 TCF7P36402 384 aaPredicted RBP11.9□□□□□ -0.5
GPNMB-206ENST00000465673 IGBP1P78318 339 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 BTG3Q14201 252 aaPredicted RBP11.9□□□□□ -0.5
GPNMB-206ENST00000465673 MARCH8Q5T0T0 291 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 ADGRD2Q7Z7M1 963 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 RTN4RL1Q86UN2 441 aaPredicted RBP11.9□□□□□ -0.5
GPNMB-206ENST00000465673 RNF135Q8IUD6 432 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 ZNF689Q96CS4 500 aaPredicted RBP11.9□□□□□ -0.5
GPNMB-206ENST00000465673 C11orf84Q9BUA3 381 aaPredicted RBP11.9□□□□□ -0.5
GPNMB-206ENST00000465673 MYL10Q9BUA6 226 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 RWDD1Q9H446 243 aaPredicted RBP11.9□□□□□ -0.5
GPNMB-206ENST00000465673 ZNF215Q9UL58 517 aaPredicted RBP11.9□□□□□ -0.5
GPNMB-206ENST00000465673 FAM50BQ9Y247 325 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 PCDHGC5Q9Y5F6 944 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 CDY2AQ9Y6F7 541 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 MRPL42Q9Y6G3 142 aaKnown RBP11.9□□□□□ -0.5
GPNMB-206ENST00000465673 COL4A6Q14031 1691 aa11.9□□□□□ -0.5
GPNMB-206ENST00000465673 NRCAMQ92823 1304 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 GSTTP1A0A1W2PQM5 241 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 HIP1O00291 1037 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 MEIS2O14770 477 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 DGKIO75912 1065 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 IBSPP21815 317 aaPredicted RBP11.89□□□□□ -0.51
GPNMB-206ENST00000465673 CD52P31358 61 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 GATMP50440 423 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 ANTXR2P58335 489 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 TMEM62Q0P6H9 643 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 PPFIA1Q13136 1202 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 WTAPQ15007 396 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 GRIK4Q16099 956 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 PAN2Q504Q3 1202 aaKnown RBP11.89□□□□□ -0.51
GPNMB-206ENST00000465673 FBXO47Q5MNV8 452 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 PCNX4Q63HM2 1172 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 CMTR1Q8N1G2 835 aaKnown RBP11.89□□□□□ -0.51
GPNMB-206ENST00000465673 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 CLP1Q92989 425 aaKnown RBP11.89□□□□□ -0.51
GPNMB-206ENST00000465673 FAM49AQ9H0Q0 323 aaPredicted RBP11.89□□□□□ -0.51
GPNMB-206ENST00000465673 PLAGL2Q9UPG8 496 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 TECTAO75443 2155 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 TRIOO75962 3097 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 ZNF318Q5VUA4 2279 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 RALGAPA2Q2PPJ7 1873 aa11.89□□□□□ -0.51
GPNMB-206ENST00000465673 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 E7EWF7 191 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 STXBP3O00186 592 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 STAM2O75886 525 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 MMP1P03956 469 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 GSPT1P15170 499 aaKnown RBP11.88□□□□□ -0.51
GPNMB-206ENST00000465673 KCNA2P16389 499 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 ITGB5P18084 799 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms