RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 PXMP2Q9NR77 195 aa17.52■□□□□ 0.4
HDAC6-214ENST00000465269 CHRNA1P02708 482 aa17.51■□□□□ 0.39
HDAC6-214ENST00000465269 GATMP50440 423 aa17.51■□□□□ 0.39
HDAC6-214ENST00000465269 ZBTB33Q86T24 672 aa17.51■□□□□ 0.39
HDAC6-214ENST00000465269 TRIM50Q86XT4 487 aa17.51■□□□□ 0.39
HDAC6-214ENST00000465269 POF1BQ8WVV4 589 aa17.51■□□□□ 0.39
HDAC6-214ENST00000465269 ZNF689Q96CS4 500 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-214ENST00000465269 IWS1Q96ST2 819 aa17.51■□□□□ 0.39
HDAC6-214ENST00000465269 RWDD3Q9Y3V2 267 aa17.51■□□□□ 0.39
HDAC6-214ENST00000465269 ACACBO00763 2458 aa17.5■□□□□ 0.39
HDAC6-214ENST00000465269 H3BRB1 525 aa17.5■□□□□ 0.39
HDAC6-214ENST00000465269 ENPP3O14638 875 aa17.5■□□□□ 0.39
HDAC6-214ENST00000465269 ORC4O43929 436 aa17.5■□□□□ 0.39
HDAC6-214ENST00000465269 LGALS2P05162 132 aa17.5■□□□□ 0.39
HDAC6-214ENST00000465269 UBA1P22314 1058 aaKnown RBP17.5■□□□□ 0.39
HDAC6-214ENST00000465269 ZMYM1Q5SVZ6 1142 aa17.5■□□□□ 0.39
HDAC6-214ENST00000465269 LINC01599Q8WXQ3 324 aa17.5■□□□□ 0.39
HDAC6-214ENST00000465269 SUSD6Q92537 303 aa17.5■□□□□ 0.39
HDAC6-214ENST00000465269 TUT1Q9H6E5 874 aaKnown RBP17.5■□□□□ 0.39
HDAC6-214ENST00000465269 TTC3P53804 2025 aa17.49■□□□□ 0.39
HDAC6-214ENST00000465269 DGKIO75912 1065 aa17.49■□□□□ 0.39
HDAC6-214ENST00000465269 CFBP00751 764 aa17.49■□□□□ 0.39
HDAC6-214ENST00000465269 SNHG28P0DPA3 235 aa17.49■□□□□ 0.39
HDAC6-214ENST00000465269 IBSPP21815 317 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-214ENST00000465269 RUFY4Q6ZNE9 571 aa17.49■□□□□ 0.39
HDAC6-214ENST00000465269 KREMEN2Q8NCW0 462 aa17.49■□□□□ 0.39
HDAC6-214ENST00000465269 APBB2Q92870 758 aa17.49■□□□□ 0.39
HDAC6-214ENST00000465269 NKD2Q969F2 451 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-214ENST00000465269 TLE6Q9H808 572 aa17.49■□□□□ 0.39
HDAC6-214ENST00000465269 PNMA2Q9UL42 364 aa17.49■□□□□ 0.39
HDAC6-214ENST00000465269 MYO10Q9HD67 2058 aa17.49■□□□□ 0.39
HDAC6-214ENST00000465269 ABCB11O95342 1321 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 PLXNA4Q9HCM2 1894 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 OPLAHO14841 1288 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 BRD1O95696 1058 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 LPIN1Q14693 890 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 PPP2R3CQ969Q6 453 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 ZKSCAN3Q9BRR0 538 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 PLVAPQ9BX97 442 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 ANAPC4Q9UJX5 808 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 CFAP47Q6ZTR5 3102 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 CHD6Q8TD26 2715 aa17.48■□□□□ 0.39
HDAC6-214ENST00000465269 HAND2P61296 217 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 ARHGAP4P98171 946 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 QRICH1Q2TAL8 776 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 FAM26DQ5JW98 314 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 ADGRF4Q8IZF3 695 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 OTUD7AQ8TE49 926 aaPredicted RBP17.47■□□□□ 0.39
HDAC6-214ENST00000465269 LMBR1Q8WVP7 490 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 P2RX5Q93086 422 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 RMDN1Q96DB5 314 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 PDCD2LQ9BRP1 358 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 MLXIPQ9HAP2 919 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 VAT1LQ9HCJ6 419 aa17.47■□□□□ 0.39
HDAC6-214ENST00000465269 DOCK5Q9H7D0 1870 aa17.46■□□□□ 0.39
HDAC6-214ENST00000465269 CAND2O75155 1236 aa17.46■□□□□ 0.39
HDAC6-214ENST00000465269 FGRP09769 529 aa17.46■□□□□ 0.39
HDAC6-214ENST00000465269 HOXA13P31271 388 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-214ENST00000465269 MICAL1Q8TDZ2 1067 aa17.46■□□□□ 0.39
HDAC6-214ENST00000465269 ZBTB10Q96DT7 871 aa17.46■□□□□ 0.39
HDAC6-214ENST00000465269 EHMT1Q9H9B1 1298 aa17.46■□□□□ 0.39
HDAC6-214ENST00000465269 HSPD1P10809 573 aaKnown RBP17.45■□□□□ 0.38
HDAC6-214ENST00000465269 ATF7P17544 494 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-214ENST00000465269 UTP14CQ5TAP6 766 aaKnown RBP17.45■□□□□ 0.38
HDAC6-214ENST00000465269 LLGL2Q6P1M3 1020 aa17.45■□□□□ 0.38
HDAC6-214ENST00000465269 RTN4RL1Q86UN2 441 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-214ENST00000465269 MCF2L2Q86YR7 1114 aa17.45■□□□□ 0.38
HDAC6-214ENST00000465269 ATP8B4Q8TF62 1192 aa17.45■□□□□ 0.38
HDAC6-214ENST00000465269 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
HDAC6-214ENST00000465269 AGO3Q9H9G7 860 aaKnown RBP17.45■□□□□ 0.38
HDAC6-214ENST00000465269 TCP11L1Q9NUJ3 509 aa17.45■□□□□ 0.38
HDAC6-214ENST00000465269 HCSTQ9UBK5 93 aa17.45■□□□□ 0.38
HDAC6-214ENST00000465269 CHD8Q9HCK8 2581 aa17.44■□□□□ 0.38
HDAC6-214ENST00000465269 ERVFC1P60507 584 aa17.44■□□□□ 0.38
HDAC6-214ENST00000465269 ADAM17P78536 824 aa17.44■□□□□ 0.38
HDAC6-214ENST00000465269 SP4Q02446 784 aa17.44■□□□□ 0.38
HDAC6-214ENST00000465269 MGAT3Q09327 533 aa17.44■□□□□ 0.38
HDAC6-214ENST00000465269 S1PR5Q9H228 398 aa17.44■□□□□ 0.38
HDAC6-214ENST00000465269 DDX19BQ9UMR2 479 aa17.44■□□□□ 0.38
HDAC6-214ENST00000465269 CCDC171Q6TFL3 1326 aa17.44■□□□□ 0.38
HDAC6-214ENST00000465269 MYH6P13533 1939 aa17.43■□□□□ 0.38
HDAC6-214ENST00000465269 DHX16O60231 1041 aaKnown RBP17.43■□□□□ 0.38
HDAC6-214ENST00000465269 ASGR2P07307 311 aa17.43■□□□□ 0.38
HDAC6-214ENST00000465269 CD52P31358 61 aa17.43■□□□□ 0.38
HDAC6-214ENST00000465269 NUBP1P53384 320 aa17.43■□□□□ 0.38
HDAC6-214ENST00000465269 APOBRQ0VD83 1088 aa17.43■□□□□ 0.38
HDAC6-214ENST00000465269 PGM5Q15124 567 aa17.43■□□□□ 0.38
HDAC6-214ENST00000465269 SYCE2Q6PIF2 218 aa17.43■□□□□ 0.38
HDAC6-214ENST00000465269 VSIG10LQ86VR7 867 aa17.43■□□□□ 0.38
HDAC6-214ENST00000465269 CMTR2Q8IYT2 770 aaKnown RBP17.43■□□□□ 0.38
HDAC6-214ENST00000465269 PI4K2BQ8TCG2 481 aa17.43■□□□□ 0.38
HDAC6-214ENST00000465269 MRPL11Q9Y3B7 192 aaKnown RBP17.43■□□□□ 0.38
HDAC6-214ENST00000465269 C2CD4DB7Z1M9 353 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 NOP56O00567 594 aaKnown RBP17.42■□□□□ 0.38
HDAC6-214ENST00000465269 PPP1R11O60927 126 aaPredicted RBP17.42■□□□□ 0.38
HDAC6-214ENST00000465269 FGAP02671 866 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 TECP42680 631 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 HSD17B4P51659 736 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 DUSP6Q16828 381 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms