RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 KCNH2Q12809 1159 aa11.17□□□□□ -0.62
APP-213ENST00000464867 COASYQ13057 564 aa11.17□□□□□ -0.62
APP-213ENST00000464867 PTK7Q13308 1070 aa11.17□□□□□ -0.62
APP-213ENST00000464867 ST3GAL2Q16842 350 aa11.17□□□□□ -0.62
APP-213ENST00000464867 SMRP1Q8NCR6 262 aa11.17□□□□□ -0.62
APP-213ENST00000464867 DBF4BQ8NFT6 615 aa11.17□□□□□ -0.62
APP-213ENST00000464867 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
APP-213ENST00000464867 TOP1MTQ969P6 601 aa11.17□□□□□ -0.62
APP-213ENST00000464867 IL17RAQ96F46 866 aa11.17□□□□□ -0.62
APP-213ENST00000464867 MSLNLQ96KJ4 702 aa11.17□□□□□ -0.62
APP-213ENST00000464867 ARMT1Q9H993 441 aa11.17□□□□□ -0.62
APP-213ENST00000464867 MRS2Q9HD23 443 aa11.17□□□□□ -0.62
APP-213ENST00000464867 LIMD1Q9UGP4 676 aa11.17□□□□□ -0.62
APP-213ENST00000464867 ATG2AQ2TAZ0 1938 aa11.17□□□□□ -0.62
APP-213ENST00000464867 DNAH14Q0VDD8 3507 aa11.16□□□□□ -0.62
APP-213ENST00000464867 B4DLN1 442 aa11.16□□□□□ -0.62
APP-213ENST00000464867 TMEM232C9JQI7 657 aa11.16□□□□□ -0.62
APP-213ENST00000464867 C5orf67F2Z3F1 127 aa11.16□□□□□ -0.62
APP-213ENST00000464867 GRM6O15303 877 aa11.16□□□□□ -0.62
APP-213ENST00000464867 CSPG5O95196 566 aa11.16□□□□□ -0.62
APP-213ENST00000464867 PDGFBP01127 241 aaPredicted RBP11.16□□□□□ -0.62
APP-213ENST00000464867 TXNP10599 105 aaKnown RBP11.16□□□□□ -0.62
APP-213ENST00000464867 CASTP20810 708 aaKnown RBP11.16□□□□□ -0.62
APP-213ENST00000464867 GTF2F1P35269 517 aaKnown RBP eCLIP11.16□□□□□ -0.62
APP-213ENST00000464867 BMPR1AP36894 532 aa11.16□□□□□ -0.62
APP-213ENST00000464867 ALDH5A1P51649 535 aaPredicted RBP11.16□□□□□ -0.62
APP-213ENST00000464867 MRPL12P52815 198 aaKnown RBP11.16□□□□□ -0.62
APP-213ENST00000464867 ZNF618Q5T7W0 954 aa11.16□□□□□ -0.62
APP-213ENST00000464867 MYSM1Q5VVJ2 828 aa11.16□□□□□ -0.62
APP-213ENST00000464867 FAM160B2Q86V87 743 aa11.16□□□□□ -0.62
APP-213ENST00000464867 UBALD2Q8IYN6 164 aa11.16□□□□□ -0.62
APP-213ENST00000464867 KIAA2013Q8IYS2 634 aa11.16□□□□□ -0.62
APP-213ENST00000464867 BAP1Q92560 729 aa11.16□□□□□ -0.62
APP-213ENST00000464867 SEPT8Q92599 483 aa11.16□□□□□ -0.62
APP-213ENST00000464867 DHX38Q92620 1227 aaKnown RBP11.16□□□□□ -0.62
APP-213ENST00000464867 HINFPQ9BQA5 517 aa11.16□□□□□ -0.62
APP-213ENST00000464867 IFIH1Q9BYX4 1025 aaKnown RBP11.16□□□□□ -0.62
APP-213ENST00000464867 MFSD1Q9H3U5 465 aa11.16□□□□□ -0.62
APP-213ENST00000464867 USP15Q9Y4E8 981 aaPredicted RBP11.16□□□□□ -0.62
APP-213ENST00000464867 CEP250Q9BV73 2442 aa11.16□□□□□ -0.62
APP-213ENST00000464867 PRKAB2O43741 272 aa11.15□□□□□ -0.62
APP-213ENST00000464867 PRKCSHP14314 528 aaPredicted RBP11.15□□□□□ -0.62
APP-213ENST00000464867 ATF7P17544 494 aaPredicted RBP11.15□□□□□ -0.62
APP-213ENST00000464867 LINC01559Q495D7 138 aa11.15□□□□□ -0.62
APP-213ENST00000464867 SLFN13Q68D06 897 aa11.15□□□□□ -0.62
APP-213ENST00000464867 LYPD8Q6UX82 237 aa11.15□□□□□ -0.62
APP-213ENST00000464867 EFHBQ8N7U6 833 aa11.15□□□□□ -0.62
APP-213ENST00000464867 TMEM105Q8N8V8 129 aa11.15□□□□□ -0.62
APP-213ENST00000464867 EHBP1Q8NDI1 1231 aa11.15□□□□□ -0.62
APP-213ENST00000464867 GMCL1P1Q8NEA9 526 aa11.15□□□□□ -0.62
APP-213ENST00000464867 CTAGE1Q96RT6 745 aa11.15□□□□□ -0.62
APP-213ENST00000464867 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.15□□□□□ -0.62
APP-213ENST00000464867 KATNAL1Q9BW62 490 aa11.15□□□□□ -0.62
APP-213ENST00000464867 SEMA4AQ9H3S1 761 aa11.15□□□□□ -0.62
APP-213ENST00000464867 TLR7Q9NYK1 1049 aaKnown RBP11.15□□□□□ -0.62
APP-213ENST00000464867 GTF2IRD1Q9UHL9 959 aa11.15□□□□□ -0.62
APP-213ENST00000464867 SYNPO2Q9UMS6 1093 aa11.15□□□□□ -0.62
APP-213ENST00000464867 MAP1BP46821 2468 aaKnown RBP11.15□□□□□ -0.62
APP-213ENST00000464867 RSPH10B2B2RC85 870 aa11.14□□□□□ -0.63
APP-213ENST00000464867 MBD4O95243 580 aa11.14□□□□□ -0.63
APP-213ENST00000464867 LMNAP02545 664 aaKnown RBP11.14□□□□□ -0.63
APP-213ENST00000464867 MMP1P03956 469 aa11.14□□□□□ -0.63
APP-213ENST00000464867 RSPH10BP0C881 870 aa11.14□□□□□ -0.63
APP-213ENST00000464867 MTMR3Q13615 1198 aa11.14□□□□□ -0.63
APP-213ENST00000464867 QPCTQ16769 361 aa11.14□□□□□ -0.63
APP-213ENST00000464867 STAG1Q8WVM7 1258 aa11.14□□□□□ -0.63
APP-213ENST00000464867 ZNF287Q9HBT7 754 aa11.14□□□□□ -0.63
APP-213ENST00000464867 CLEC1BQ9P126 229 aa11.14□□□□□ -0.63
APP-213ENST00000464867 HDAC6Q9UBN7 1215 aa11.14□□□□□ -0.63
APP-213ENST00000464867 CCPG1Q9ULG6 757 aa11.14□□□□□ -0.63
APP-213ENST00000464867 PTPDC1A2A3K4 754 aa11.13□□□□□ -0.63
APP-213ENST00000464867 TTLL1O95922 423 aa11.13□□□□□ -0.63
APP-213ENST00000464867 THPOP40225 353 aa11.13□□□□□ -0.63
APP-213ENST00000464867 CLCN5P51795 746 aa11.13□□□□□ -0.63
APP-213ENST00000464867 BAATQ14032 418 aaPredicted RBP11.13□□□□□ -0.63
APP-213ENST00000464867 MBTPS1Q14703 1052 aa11.13□□□□□ -0.63
APP-213ENST00000464867 PLEKHG4Q58EX7 1191 aa11.13□□□□□ -0.63
APP-213ENST00000464867 MUM1L1Q5H9M0 696 aa11.13□□□□□ -0.63
APP-213ENST00000464867 DHX37Q8IY37 1157 aaKnown RBP11.13□□□□□ -0.63
APP-213ENST00000464867 ZNF444Q8N0Y2 327 aaPredicted RBP11.13□□□□□ -0.63
APP-213ENST00000464867 COPS5Q92905 334 aa11.13□□□□□ -0.63
APP-213ENST00000464867 MKL1Q969V6 931 aa11.13□□□□□ -0.63
APP-213ENST00000464867 EAF2Q96CJ1 260 aaPredicted RBP11.13□□□□□ -0.63
APP-213ENST00000464867 PURBQ96QR8 312 aaKnown RBP11.13□□□□□ -0.63
APP-213ENST00000464867 ALG1Q9BT22 464 aa11.13□□□□□ -0.63
APP-213ENST00000464867 PLVAPQ9BX97 442 aa11.13□□□□□ -0.63
APP-213ENST00000464867 ARPP21Q9UBL0 812 aaPredicted RBP11.13□□□□□ -0.63
APP-213ENST00000464867 SLC4A4Q9Y6R1 1079 aa11.13□□□□□ -0.63
APP-213ENST00000464867 SPTBN2O15020 2390 aa11.13□□□□□ -0.63
APP-213ENST00000464867 MYO10Q9HD67 2058 aa11.13□□□□□ -0.63
APP-213ENST00000464867 GREB1LQ9C091 1923 aaPredicted RBP11.13□□□□□ -0.63
APP-213ENST00000464867 LCTP09848 1927 aa11.12□□□□□ -0.63
APP-213ENST00000464867 TCRBV5S4A2TA0A5A2 114 aa11.12□□□□□ -0.63
APP-213ENST00000464867 FSD2A1L4K1 749 aa11.12□□□□□ -0.63
APP-213ENST00000464867 MMP3P08254 477 aa11.12□□□□□ -0.63
APP-213ENST00000464867 SRGAP2BP0DMP2 458 aa11.12□□□□□ -0.63
APP-213ENST00000464867 SDHBP21912 280 aa11.12□□□□□ -0.63
APP-213ENST00000464867 SLC1A4P43007 532 aa11.12□□□□□ -0.63
APP-213ENST00000464867 NRIP1P48552 1158 aa11.12□□□□□ -0.63
APP-213ENST00000464867 DGKDQ16760 1214 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms