RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 SYCE2Q6PIF2 218 aa14.67□□□□□ -0.06
SNX17-205ENST00000464279 TMEM184AQ6ZMB5 413 aa14.67□□□□□ -0.06
SNX17-205ENST00000464279 CMTR2Q8IYT2 770 aaKnown RBP14.67□□□□□ -0.06
SNX17-205ENST00000464279 OTUD7AQ8TE49 926 aaPredicted RBP14.67□□□□□ -0.06
SNX17-205ENST00000464279 GPATCH3Q96I76 525 aa14.67□□□□□ -0.06
SNX17-205ENST00000464279 NECTIN4Q96NY8 510 aa14.67□□□□□ -0.06
SNX17-205ENST00000464279 RTKNQ9BST9 563 aa14.67□□□□□ -0.06
SNX17-205ENST00000464279 LNPKQ9C0E8 428 aa14.67□□□□□ -0.06
SNX17-205ENST00000464279 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNX17-205ENST00000464279 RANBP17Q9H2T7 1088 aaKnown RBP14.67□□□□□ -0.06
SNX17-205ENST00000464279 ECHDC1Q9NTX5 307 aa14.67□□□□□ -0.06
SNX17-205ENST00000464279 SALL3Q9BXA9 1300 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 ZFYVE26Q68DK2 2539 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 DCDC2BA2VCK2 349 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 MINDY4BA8MYZ0 360 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 PRR5-ARHGAP8B1AHC4 643 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 HOXB8P17481 243 aaPredicted RBP14.66□□□□□ -0.06
SNX17-205ENST00000464279 ARHGAP8P85298 464 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 TSHZ3Q63HK5 1081 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 CHD1LQ86WJ1 897 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 GPR161Q8N6U8 529 aaKnown RBP14.66□□□□□ -0.06
SNX17-205ENST00000464279 TDRD5Q8NAT2 981 aaKnown RBP14.66□□□□□ -0.06
SNX17-205ENST00000464279 CLEC4DQ8WXI8 215 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 RIN2Q8WYP3 895 aaPredicted RBP14.66□□□□□ -0.06
SNX17-205ENST00000464279 BOLA2Q9H3K6 86 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 POMKQ9H5K3 350 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 TTC41PQ6P2S7 1318 aa14.66□□□□□ -0.06
SNX17-205ENST00000464279 HOXD8P13378 290 aaPredicted RBP14.65□□□□□ -0.06
SNX17-205ENST00000464279 MX1P20591 662 aa14.65□□□□□ -0.06
SNX17-205ENST00000464279 LMNB2Q03252 620 aa14.65□□□□□ -0.06
SNX17-205ENST00000464279 UBE3AQ05086 875 aa14.65□□□□□ -0.06
SNX17-205ENST00000464279 LAMC2Q13753 1193 aa14.65□□□□□ -0.06
SNX17-205ENST00000464279 ZDHHC14Q8IZN3 488 aa14.65□□□□□ -0.06
SNX17-205ENST00000464279 NCDNQ9UBB6 729 aa14.65□□□□□ -0.06
SNX17-205ENST00000464279 CDH22Q9UJ99 828 aa14.65□□□□□ -0.06
SNX17-205ENST00000464279 FBXL21Q9UKT6 434 aa14.65□□□□□ -0.06
SNX17-205ENST00000464279 SETXQ7Z333 2677 aaKnown RBP14.65□□□□□ -0.06
SNX17-205ENST00000464279 TREHO43280 583 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 PPFIA3O75145 1194 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 TSPY3P0CV98 308 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 TSPY8P0CW00 308 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 HOXC8P31273 242 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 KCNC3Q14003 757 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 CES5AQ6NT32 575 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 SIX5Q8N196 739 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 SUMF1Q8NBK3 374 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 NEDD1Q8NHV4 660 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 ERVK-5Q9HDB9 667 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 LIMD1Q9UGP4 676 aa14.64□□□□□ -0.07
SNX17-205ENST00000464279 MYO10Q9HD67 2058 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 ENPP3O14638 875 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 COL9A3Q14050 684 aaPredicted RBP14.63□□□□□ -0.07
SNX17-205ENST00000464279 UBE3CQ15386 1083 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 CCDC96Q2M329 555 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 TPRNQ4KMQ1 711 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 PDE12Q6L8Q7 609 aaKnown RBP14.63□□□□□ -0.07
SNX17-205ENST00000464279 LLGL2Q6P1M3 1020 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 RASGRP2Q7LDG7 609 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 PI4K2BQ8TCG2 481 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 RASGRP4Q8TDF6 673 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 RNF216Q9NWF9 866 aaPredicted RBP14.63□□□□□ -0.07
SNX17-205ENST00000464279 PAG1Q9NWQ8 432 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 DDX41Q9UJV9 622 aaKnown RBP14.63□□□□□ -0.07
SNX17-205ENST00000464279 PNMA2Q9UL42 364 aa14.63□□□□□ -0.07
SNX17-205ENST00000464279 KINO60870 393 aaKnown RBP14.62□□□□□ -0.07
SNX17-205ENST00000464279 PPFIA4O75335 1185 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 CHGBP05060 677 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 SP9P0CG40 484 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 GHRP10912 638 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 PDE1AP54750 535 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 ITIH3Q06033 890 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 PAN2Q504Q3 1202 aaKnown RBP14.62□□□□□ -0.07
SNX17-205ENST00000464279 FAM26DQ5JW98 314 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 PPP4R3BQ5MIZ7 849 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 GIMAP6Q6P9H5 292 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 MRVI1Q9Y6F6 885 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 KIAA1671Q9BY89 1806 aa14.62□□□□□ -0.07
SNX17-205ENST00000464279 SMIM10L2AP0DMW4 78 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 SMIM10L2BP0DMW5 78 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 RFX1P22670 979 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 MTHFRP42898 656 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 STXBP2Q15833 593 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 PPM1JQ5JR12 505 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 VARS2Q5ST30 1063 aaKnown RBP14.61□□□□□ -0.07
SNX17-205ENST00000464279 SYDE2Q5VT97 1194 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 ERICH6BQ5W0A0 696 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 CENPQQ7L2Z9 268 aaPredicted RBP14.61□□□□□ -0.07
SNX17-205ENST00000464279 CRIPAKQ8N1N5 446 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 PUS7LQ9H0K6 701 aaKnown RBP14.61□□□□□ -0.07
SNX17-205ENST00000464279 ADAM7Q9H2U9 754 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 STX8Q9UNK0 236 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 MTMR7Q9Y216 660 aa14.61□□□□□ -0.07
SNX17-205ENST00000464279 TTC3P53804 2025 aa14.6□□□□□ -0.07
SNX17-205ENST00000464279 GSG1L2A8MUP6 293 aa14.6□□□□□ -0.07
SNX17-205ENST00000464279 STK25O00506 426 aa14.6□□□□□ -0.07
SNX17-205ENST00000464279 FSCN2O14926 492 aa14.6□□□□□ -0.07
SNX17-205ENST00000464279 SLC16A2P36021 539 aa14.6□□□□□ -0.07
SNX17-205ENST00000464279 ERVFC1P60507 584 aa14.6□□□□□ -0.07
SNX17-205ENST00000464279 PLPP4Q5VZY2 271 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms