RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 PPP1R1BQ9UD71 204 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-208ENST00000464001 ZDHHC9Q9Y397 364 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 NKRFO15226 690 aaKnown RBP eCLIP6.55□□□□□ -1.36
ITGB1-208ENST00000464001 PDPK1O15530 556 aa6.55□□□□□ -1.36
ITGB1-208ENST00000464001 ZC3H6P61129 1189 aaKnown RBP6.55□□□□□ -1.36
ITGB1-208ENST00000464001 SMAD2Q15796 467 aaKnown RBP6.55□□□□□ -1.36
ITGB1-208ENST00000464001 YOD1Q5VVQ6 348 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-208ENST00000464001 SCUBE1Q8IWY4 988 aa6.55□□□□□ -1.36
ITGB1-208ENST00000464001 IPO9Q96P70 1041 aaKnown RBP6.55□□□□□ -1.36
ITGB1-208ENST00000464001 IPPKQ9H8X2 491 aa6.55□□□□□ -1.36
ITGB1-208ENST00000464001 JADE2Q9NQC1 790 aa6.55□□□□□ -1.36
ITGB1-208ENST00000464001 PPP4R1LQ9P1A2 415 aa6.55□□□□□ -1.36
ITGB1-208ENST00000464001 C1QTNF3-AMACRE9PGA6 284 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 B4GALT4O60513 344 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 LTFP02788 710 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 ZNF20P17024 532 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 EPHA5P54756 1037 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 EPHB4P54760 987 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 SKIDA1Q1XH10 827 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 NAALADL2Q58DX5 795 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 KCTD1Q719H9 257 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 IGDCC4Q8TDY8 1250 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 DVL3Q92997 716 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-208ENST00000464001 CDC6Q99741 560 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 CCDC113Q9H0I3 377 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 ARHGAP20Q9P2F6 1191 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 ADAM29Q9UKF5 820 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 MSRB2Q9Y3D2 182 aa6.54□□□□□ -1.36
ITGB1-208ENST00000464001 ASXL2Q76L83 1435 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 AQP7O14520 342 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 COL6A1P12109 1028 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 PFKPQ01813 784 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 PAK1Q13153 545 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 RASGRF1Q13972 1273 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 MTERF2Q49AM1 385 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 CD276Q5ZPR3 534 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 MAMDC2Q7Z304 686 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-208ENST00000464001 NUDT10Q8NFP7 164 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 NUDT11Q96G61 164 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 TMPRSS5Q9H3S3 457 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 ST6GALNAC2Q9UJ37 374 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 ZFP69BQ9UJL9 534 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 TELO2Q9Y4R8 837 aa6.53□□□□□ -1.36
ITGB1-208ENST00000464001 KLHL18O94889 574 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 ATP2B1P20020 1258 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 GLRBP48167 497 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 PHF19Q5T6S3 580 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 NBPF6Q5VWK0 638 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 SLFN13Q68D06 897 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 Q6ZUG5 572 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 SPATC1Q76KD6 591 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 MTDHQ86UE4 582 aaKnown RBP6.52□□□□□ -1.37
ITGB1-208ENST00000464001 CIR1Q86X95 450 aaPredicted RBP6.52□□□□□ -1.37
ITGB1-208ENST00000464001 NLGN4XQ8N0W4 816 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 PTPRN2Q92932 1015 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 NBPF4Q96M43 638 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 TRAF6Q9Y4K3 522 aa6.52□□□□□ -1.37
ITGB1-208ENST00000464001 TRBV23-1A0A0A0MS06 115 aa6.51□□□□□ -1.37
ITGB1-208ENST00000464001 ZNF839A8K0R7 811 aa6.51□□□□□ -1.37
ITGB1-208ENST00000464001 KNG1P01042 644 aa6.51□□□□□ -1.37
ITGB1-208ENST00000464001 NAT1P18440 290 aa6.51□□□□□ -1.37
ITGB1-208ENST00000464001 SUMO1P63165 101 aaKnown RBP6.51□□□□□ -1.37
ITGB1-208ENST00000464001 SSRP1Q08945 709 aaKnown RBP6.51□□□□□ -1.37
ITGB1-208ENST00000464001 RALYLQ86SE5 291 aaKnown RBP6.51□□□□□ -1.37
ITGB1-208ENST00000464001 STPG3Q8N7X2 389 aa6.51□□□□□ -1.37
ITGB1-208ENST00000464001 ZBTB38Q8NAP3 1195 aaPredicted RBP6.51□□□□□ -1.37
ITGB1-208ENST00000464001 KISS1RQ969F8 398 aaPredicted RBP6.51□□□□□ -1.37
ITGB1-208ENST00000464001 KCND1Q9NSA2 647 aa6.51□□□□□ -1.37
ITGB1-208ENST00000464001 SIRPGQ9P1W8 387 aa6.51□□□□□ -1.37
ITGB1-208ENST00000464001 PFDN2Q9UHV9 154 aa6.51□□□□□ -1.37
ITGB1-208ENST00000464001 ACOT7O00154 380 aa6.5□□□□□ -1.37
ITGB1-208ENST00000464001 ADCY3O60266 1144 aa6.5□□□□□ -1.37
ITGB1-208ENST00000464001 GPR19Q15760 415 aa6.5□□□□□ -1.37
ITGB1-208ENST00000464001 BTBD8Q5XKL5 378 aa6.5□□□□□ -1.37
ITGB1-208ENST00000464001 EP400NLQ6ZTU2 488 aa6.5□□□□□ -1.37
ITGB1-208ENST00000464001 AJUBAQ96IF1 538 aa6.5□□□□□ -1.37
ITGB1-208ENST00000464001 CDK5RAP1Q96SZ6 601 aaKnown RBP6.5□□□□□ -1.37
ITGB1-208ENST00000464001 CD244Q9BZW8 370 aa6.5□□□□□ -1.37
ITGB1-208ENST00000464001 TANGO6Q9C0B7 1094 aa6.5□□□□□ -1.37
ITGB1-208ENST00000464001 CCDC85CA6NKD9 419 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 H0Y858 1186 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 WNT9AO14904 365 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 GSTA4O15217 222 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 GPR42O15529 346 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 ICAM4Q14773 271 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 DPP8Q6V1X1 898 aaPredicted RBP6.49□□□□□ -1.37
ITGB1-208ENST00000464001 ARHGAP36Q6ZRI8 547 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 REXO1L1PQ8IX06 675 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 SH3RF2Q8TEC5 729 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 FBXW5Q969U6 566 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 DEF6Q9H4E7 631 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 CATSPERZQ9NTU4 200 aa6.49□□□□□ -1.37
ITGB1-208ENST00000464001 TCRBV5S4A2TA0A5A2 114 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 MATN3O15232 486 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 TNFRSF1AP19438 455 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 GUCY1A3Q02108 690 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 DBPQ10586 325 aaPredicted RBP6.48□□□□□ -1.37
ITGB1-208ENST00000464001 FAM209AQ5JX71 171 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 IFNL2Q8IZJ0 200 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms