RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 UPF3AQ9H1J1 476 aaKnown RBP15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 IGKV6D-21A0A0A0MT36 114 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 A6NJR5 290 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 HOXD8P13378 290 aaPredicted RBP15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 EPHA7Q15375 998 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 TMEM266Q2M3C6 531 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 SHC4Q6S5L8 630 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 USP49Q70CQ1 688 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 TLK2Q86UE8 772 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 OR6J1Q8NGC5 347 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 PPTC7Q8NI37 304 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 AK8Q96MA6 479 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 SPATA33Q96N06 139 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 MMTAG2Q9BU76 263 aaKnown RBP15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 MCOLN1Q9GZU1 580 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 PAK6Q9NQU5 681 aaPredicted RBP15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 LRWD1Q9UFC0 647 aa15.63■□□□□ 0.09
PHACTR4-203ENST00000463428 MYH9P35579 1960 aaKnown RBP15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 PP2D1A8MPX8 630 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 CHMP2AO43633 222 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 ADAMTS4O75173 837 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 RARBP10826 455 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 CCL5P13501 91 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 CDC25AP30304 524 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 SFNP31947 248 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 ME1P48163 572 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 JAK3P52333 1124 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 SP4Q02446 784 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 SPECC1Q5M775 1068 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 ADALQ6DHV7 355 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 NCAPH2Q6IBW4 605 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 MIER3Q7Z3K6 550 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 SMAP1Q8IYB5 467 aaPredicted RBP15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 RDM1Q8NG50 284 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 AFG1LQ8WV93 481 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 SEPT1Q8WYJ6 367 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 GBP4Q96PP9 640 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 PCYT2Q99447 389 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 HSD17B14Q9BPX1 270 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 DISC1Q9NRI5 854 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 SYNRGQ9UMZ2 1314 aa15.62■□□□□ 0.09
PHACTR4-203ENST00000463428 MYADML2A6NDP7 307 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 WDR64B1ANS9 1081 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 MSCO60682 206 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 MMP3P08254 477 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 SUPT20HL2P0C7V6 817 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 KLHDC9Q8NEP7 349 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 EPSTI1Q96J88 318 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 EIF2AK1Q9BQI3 630 aaKnown RBP15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 RAB34Q9BZG1 259 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 AP5M1Q9H0R1 490 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 PCDHA10Q9Y5I2 948 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 CENPFP49454 3210 aa15.61■□□□□ 0.09
PHACTR4-203ENST00000463428 A0A1W2PQ27 194 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 A0A1W2PQ64 194 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 A0A1W2PQD8 194 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 GADD45BO75293 160 aaPredicted RBP15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 PPFIA4O75335 1185 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 LGR5O75473 907 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 SLITRK3O94933 977 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 PGK1P00558 417 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 SPATA31C1P0DKV0 1188 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 TCF7P36402 384 aaPredicted RBP15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 CSPP1Q1MSJ5 1256 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 RESP18Q5W5W9 173 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 CCSAPQ6IQ19 270 aaPredicted RBP15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 CCDC60Q8IWA6 550 aaPredicted RBP15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 CCSER1Q9C0I3 900 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 XPNPEP3Q9NQH7 507 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 RGL1Q9NZL6 768 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 FAM237AA0A1B0GTK4 181 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 NOP56O00567 594 aaKnown RBP15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 PRPF40AO75400 957 aaKnown RBP15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 MED24O75448 989 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 PSAPP07602 524 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 CMA1P23946 247 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 RPA1P27694 616 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 CST5P28325 142 aaPredicted RBP15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 BEX3Q00994 111 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 ECM1Q16610 540 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 HYIQ5T013 277 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 SWSAP1Q6NVH7 229 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 MIS18BP1Q6P0N0 1132 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 CATSPER3Q86XQ3 398 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 SYMPKQ92797 1274 aaKnown RBP15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 DYDC2Q96IM9 177 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 POLR3CQ9BUI4 534 aaPredicted RBP15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 RNF208Q9H0X6 261 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 LMBRD1Q9NUN5 540 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 WRAP73Q9P2S5 460 aaPredicted RBP15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 TCEAL9Q9UHQ7 104 aa15.6■□□□□ 0.09
PHACTR4-203ENST00000463428 STBD1O95210 358 aa15.59■□□□□ 0.09
PHACTR4-203ENST00000463428 MYCP01106 439 aaPredicted RBP15.59■□□□□ 0.09
PHACTR4-203ENST00000463428 P4HBP07237 508 aaKnown RBP15.59■□□□□ 0.09
PHACTR4-203ENST00000463428 ATP4AP20648 1035 aa15.59■□□□□ 0.09
PHACTR4-203ENST00000463428 CPT1AP50416 773 aa15.59■□□□□ 0.09
PHACTR4-203ENST00000463428 GRB10Q13322 594 aa15.59■□□□□ 0.09
PHACTR4-203ENST00000463428 FSCN1Q16658 493 aaKnown RBP15.59■□□□□ 0.09
PHACTR4-203ENST00000463428 UGCGQ16739 394 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms