RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 MTMR1Q13613 665 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 HIC1Q14526 733 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 PFKFB3Q16875 520 aaPredicted RBP8.33□□□□□ -1.08
PTPRF-210ENST00000463041 UTP14CQ5TAP6 766 aaKnown RBP8.33□□□□□ -1.08
PTPRF-210ENST00000463041 ERICH6BQ5W0A0 696 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 TRAF7Q6Q0C0 670 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 RPAINQ86UA6 219 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 HERC6Q8IVU3 1022 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 CCDC12Q8WUD4 166 aaPredicted RBP8.33□□□□□ -1.08
PTPRF-210ENST00000463041 BRF1Q92994 677 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 TANC1Q9C0D5 1861 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 SMARCAD1Q9H4L7 1026 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 SETD4Q9NVD3 440 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 NAP1L2Q9ULW6 460 aaPredicted RBP8.33□□□□□ -1.08
PTPRF-210ENST00000463041 EVPLQ92817 2033 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 NFASCO94856 1347 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 MEIS1O00470 390 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 TLL1O43897 1013 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 LGR5O75473 907 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 SCG2P13521 617 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 CPA1P15085 419 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 MYOGP15173 224 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 POU3F3P20264 500 aaPredicted RBP8.32□□□□□ -1.08
PTPRF-210ENST00000463041 GNA11P29992 359 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 TCF7P36402 384 aaPredicted RBP8.32□□□□□ -1.08
PTPRF-210ENST00000463041 ZNF76P36508 570 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 CLK2P49760 499 aaKnown RBP8.32□□□□□ -1.08
PTPRF-210ENST00000463041 WDR5P61964 334 aaKnown RBP8.32□□□□□ -1.08
PTPRF-210ENST00000463041 AKAP17AQ02040 695 aaKnown RBP8.32□□□□□ -1.08
PTPRF-210ENST00000463041 SP4Q02446 784 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 CEP55Q53EZ4 464 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 FAM26DQ5JW98 314 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 PPP2R2DQ66LE6 453 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 TYW1BQ6NUM6 668 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 RUFY3Q7L099 469 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 NIPA1Q7RTP0 329 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 WNT8BQ93098 351 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 RAD9AQ99638 391 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 SDF4Q9BRK5 362 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 ZBED2Q9BTP6 218 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 TM6SF1Q9BZW5 370 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 ZMYND12Q9H0C1 365 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 C6orf50Q9HD87 102 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 KCNH7Q9NS40 1196 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 ERAP1Q9NZ08 941 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 SLC9A2Q9UBY0 812 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 MICAL3Q7RTP6 2002 aa8.32□□□□□ -1.08
PTPRF-210ENST00000463041 VCANP13611 3396 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 ESYT2A0FGR8 921 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 RRN3P2A6NIE6 340 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 ATG7O95352 703 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 RPLP2P05387 115 aaKnown RBP8.31□□□□□ -1.08
PTPRF-210ENST00000463041 CA3P07451 260 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 CYP3A4P08684 503 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 ARP10275 920 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 IFNAR1P17181 557 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 IGFBP4P22692 258 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 PDIA3P30101 505 aaKnown RBP8.31□□□□□ -1.08
PTPRF-210ENST00000463041 SREBF1P36956 1147 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 ARHGAP4P98171 946 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 ADGRE1Q14246 886 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 MBTPS1Q14703 1052 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 PKN1Q16512 942 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 PLEKHG4Q58EX7 1191 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 TAF2Q6P1X5 1199 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 PLPPR4Q7Z2D5 763 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 DBF4BQ8NFT6 615 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 CYP2W1Q8TAV3 490 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 BICD2Q8TD16 824 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 SEPT8Q92599 483 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 GLG1Q92896 1179 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 ZNF274Q96GC6 653 aaPredicted RBP8.31□□□□□ -1.08
PTPRF-210ENST00000463041 ANO3Q9BYT9 981 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 AZI2Q9H6S1 392 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 ZSWIM6Q9HCJ5 1215 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 JPH1Q9HDC5 661 aaPredicted RBP8.31□□□□□ -1.08
PTPRF-210ENST00000463041 PPP4R2Q9NY27 417 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 TELO2Q9Y4R8 837 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 CYP46A1Q9Y6A2 500 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 PTPRSQ13332 1948 aa8.31□□□□□ -1.08
PTPRF-210ENST00000463041 TTC28Q96AY4 2481 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 REV3LO60673 3130 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 MBLAC1A4D2B0 266 aaPredicted RBP8.3□□□□□ -1.08
PTPRF-210ENST00000463041 GJB5O95377 273 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 STAT5BP51692 787 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 ACTR2P61160 394 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 TAP1Q03518 808 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 PPFIA1Q13136 1202 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 NTRK3Q16288 839 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 JAKMIP3Q5VZ66 844 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 RSPH3Q86UC2 560 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 TRIM50Q86XT4 487 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 LMBR1Q8WVP7 490 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 SYMPKQ92797 1274 aaKnown RBP8.3□□□□□ -1.08
PTPRF-210ENST00000463041 APBB2Q92870 758 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 RNF26Q9BY78 433 aaPredicted RBP8.3□□□□□ -1.08
PTPRF-210ENST00000463041 TSPYL2Q9H2G4 693 aaPredicted RBP8.3□□□□□ -1.08
PTPRF-210ENST00000463041 AGO4Q9HCK5 861 aaKnown RBP8.3□□□□□ -1.08
PTPRF-210ENST00000463041 SH3GLB2Q9NR46 395 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 TMEM260Q9NX78 707 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms