RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	ZNF215	Q9UL58	517 aa	Predicted RBP	10.91	□□□□□ -0.66
PSMD4-208	ENST00000462970	WDR81	Q562E7	1941 aa		10.91	□□□□□ -0.66
PSMD4-208	ENST00000462970	IGLV3-22	A0A075B6J6	115 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	GSTTP1	A0A1W2PQM5	241 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	FAM205C	A6NFA0	338 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	SPDYE4	A6NLX3	237 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	IPO5	O00410	1097 aa	Known RBP	10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	BACH1	O14867	736 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	KIAA0355	O15063	1070 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	MARCH6	O60337	910 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	F2	P00734	622 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	SUPT20HL2	P0C7V6	817 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	ATP2B1	P20020	1258 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	MCM2	P49736	904 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	CCL23	P55773	120 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	ACTR2	P61160	394 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	HMGN5	P82970	282 aa	Known RBP	10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	ITGB3BP	Q13352	177 aa	Predicted RBP	10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	NPY5R	Q15761	445 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	PTGIS	Q16647	500 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	GDF6	Q6KF10	455 aa	Predicted RBP	10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	NFRKB	Q6P4R8	1299 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	DIS3L2	Q8IYB7	885 aa	Known RBP	10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	CRYGN	Q8WXF5	182 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	SEZ6L	Q9BYH1	1024 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	AZI2	Q9H6S1	392 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	TBX21	Q9UL17	535 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	SAMM50	Q9Y512	469 aa		10.9	□□□□□ -0.66
PSMD4-208	ENST00000462970	NFASC	O94856	1347 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	UMODL1	Q5DID0	1318 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	SCN5A	Q14524	2016 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	C17orf102	A2RUQ5	167 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	BTBD18	B2RXH4	712 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	CHMP2A	O43633	222 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	GAS7	O60861	476 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	TIMP1	P01033	207 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	CD4	P01730	458 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	MMP1	P03956	469 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	SMIM10L2A	P0DMW4	78 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	SMIM10L2B	P0DMW5	78 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	ITGB8	P26012	769 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	USP11	P51784	963 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	ZNF200	P98182	395 aa	Predicted RBP	10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	FPGS	Q05932	587 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	PTPN11	Q06124	597 aa	Predicted RBP	10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	MKRN4P	Q13434	485 aa	Predicted RBP	10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	NEK8	Q86SG6	692 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	RETREG2	Q8NC44	543 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	GJA10	Q969M2	543 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	GDF15	Q99988	308 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	C16orf70	Q9BSU1	422 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	PRO3102	Q9H379	93 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	DDX25	Q9UHL0	483 aa	Known RBP	10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970	KIF3A	Q9Y496	699 aa		10.89	□□□□□ -0.67
PSMD4-208	ENST00000462970		M0R2N6	131 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	HAS3	O00219	553 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	MSH4	O15457	936 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	CCNT1	O60563	726 aa	Known RBP	10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	CCNE2	O96020	404 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	HOXD8	P13378	290 aa	Predicted RBP	10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	CIITA	P33076	1130 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	IGBP1	P78318	339 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	EARS2	Q5JPH6	523 aa	Known RBP	10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	LRCH2	Q5VUJ6	765 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	FAM160B1	Q5W0V3	765 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	MCTP1	Q6DN14	999 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	CKAP2L	Q8IYA6	745 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	TMEM199	Q8N511	208 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	CCDC155	Q8N6L0	562 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	NOC4L	Q9BVI4	516 aa	Known RBP	10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	TEKT3	Q9BXF9	490 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	SMARCAD1	Q9H4L7	1026 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	TBC1D22B	Q9NU19	505 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	SETD4	Q9NVD3	440 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	GTF2IRD1	Q9UHL9	959 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	SMC3	Q9UQE7	1217 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	TRPC6	Q9Y210	931 aa		10.88	□□□□□ -0.67
PSMD4-208	ENST00000462970	SOX1	O00570	391 aa	Predicted RBP	10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	ACR	P10323	421 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	CSF2RA	P15509	400 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	GJB2	P29033	226 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	STAT5B	P51692	787 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	KRT76	Q01546	638 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	PPFIA1	Q13136	1202 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	PPIG	Q13427	754 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	BFSP2	Q13515	415 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	MFSD5	Q6N075	450 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	SWSAP1	Q6NVH7	229 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	MIS18BP1	Q6P0N0	1132 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	IL27	Q8NEV9	243 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	ATP6V0A1	Q93050	837 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	LENG9	Q96B70	501 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	SCLY	Q96I15	445 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	LRCH3	Q96II8	777 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	RNPEP	Q9H4A4	650 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	ERAP1	Q9NZ08	941 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970	EVPL	Q92817	2033 aa		10.87	□□□□□ -0.67
PSMD4-208	ENST00000462970		H3BQV1	296 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	DHX15	O43143	795 aa	Known RBP	10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms