RNA–Protein interactions for RNA: ENST00000462817.5

LIMS1-211, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 4

Gene LIMS1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-211ENST00000462817 AZI2Q9H6S1 392 aa17.69■□□□□ 0.42
LIMS1-211ENST00000462817 SLC28A3Q9HAS3 691 aa17.69■□□□□ 0.42
LIMS1-211ENST00000462817 JPH1Q9HDC5 661 aaPredicted RBP17.69■□□□□ 0.42
LIMS1-211ENST00000462817 SETD4Q9NVD3 440 aa17.69■□□□□ 0.42
LIMS1-211ENST00000462817 SLC9A2Q9UBY0 812 aa17.69■□□□□ 0.42
LIMS1-211ENST00000462817 MARK3P27448 753 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 CLK2P49760 499 aaKnown RBP17.68■□□□□ 0.42
LIMS1-211ENST00000462817 ARHGAP4P98171 946 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 RBL2Q08999 1139 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 SCN5AQ14524 2016 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 NTRK3Q16288 839 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 PKN1Q16512 942 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 ZNF618Q5T7W0 954 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 CYP2W1Q8TAV3 490 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 MYLIPQ8WY64 445 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 CTAGE1Q96RT6 745 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 SMARCAD1Q9H4L7 1026 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 ERAP1Q9NZ08 941 aa17.68■□□□□ 0.42
LIMS1-211ENST00000462817 RSPH10B2B2RC85 870 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 TREHO43280 583 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 BAIAP3O94812 1187 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 RSPH10BP0C881 870 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 ARP10275 920 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 FOSL2P15408 326 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 RABGGTBP53611 331 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 NLRP5P59047 1200 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 SERINC5Q86VE9 423 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 PLA2G4DQ86XP0 818 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
LIMS1-211ENST00000462817 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 TELO2Q9Y4R8 837 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 NRCAMQ92823 1304 aa17.67■□□□□ 0.42
LIMS1-211ENST00000462817 GSTTP1A0A1W2PQM5 241 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 KIF28PB7ZC32 967 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 MEIS1O00470 390 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 ANAPC15P60006 121 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 HIC1Q14526 733 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 CNKSR3Q6P9H4 555 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 NIPA1Q7RTP0 329 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 PHOSPHO2Q8TCD6 241 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 VWCEQ96DN2 955 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 SLC9A7Q96T83 725 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
LIMS1-211ENST00000462817 NKX2-4Q9H2Z4 354 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 AGO4Q9HCK5 861 aaKnown RBP17.66■□□□□ 0.42
LIMS1-211ENST00000462817 SH3GLB2Q9NR46 395 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 TCEAL9Q9UHQ7 104 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 PCDHA11Q9Y5I1 949 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 TANC1Q9C0D5 1861 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 NFASCO94856 1347 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 EMSYQ7Z589 1322 aa17.66■□□□□ 0.42
LIMS1-211ENST00000462817 CDKL5O76039 1030 aa17.65■□□□□ 0.42
LIMS1-211ENST00000462817 DEXIO95424 95 aa17.65■□□□□ 0.42
LIMS1-211ENST00000462817 PPFIA1Q13136 1202 aa17.65■□□□□ 0.42
LIMS1-211ENST00000462817 IKBKEQ14164 716 aa17.65■□□□□ 0.42
LIMS1-211ENST00000462817 GRIN2CQ14957 1233 aa17.65■□□□□ 0.42
LIMS1-211ENST00000462817 ANKRD1Q15327 319 aa17.65■□□□□ 0.42
LIMS1-211ENST00000462817 TRIM71Q2Q1W2 868 aaKnown RBP17.65■□□□□ 0.42
LIMS1-211ENST00000462817 WNT8BQ93098 351 aa17.65■□□□□ 0.42
LIMS1-211ENST00000462817 GAS2L1Q99501 681 aaPredicted RBP17.65■□□□□ 0.42
LIMS1-211ENST00000462817 DDX39AO00148 427 aaKnown RBP17.64■□□□□ 0.41
LIMS1-211ENST00000462817 NBNO60934 754 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 EFCAB14O75071 495 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 CYP3A4P08684 503 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 CTSHP09668 335 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 ACTR2P61160 394 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 IGBP1P78318 339 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 PPP2R2DQ66LE6 453 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 RSPH3Q86UC2 560 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 RASGRP4Q8TDF6 673 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 LMBR1Q8WVP7 490 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 ZBED2Q9BTP6 218 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 TRPC6Q9Y210 931 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 KAT6AQ92794 2004 aa17.64■□□□□ 0.41
LIMS1-211ENST00000462817 FAM86B1E9PN63 330 aa17.63■□□□□ 0.41
LIMS1-211ENST00000462817 BACH1O14867 736 aa17.63■□□□□ 0.41
LIMS1-211ENST00000462817 CAND2O75155 1236 aa17.63■□□□□ 0.41
LIMS1-211ENST00000462817 LGR5O75473 907 aa17.63■□□□□ 0.41
LIMS1-211ENST00000462817 CXCL10P02778 98 aa17.63■□□□□ 0.41
LIMS1-211ENST00000462817 FAM86B2P0C5J1 330 aa17.63■□□□□ 0.41
LIMS1-211ENST00000462817 HOXC8P31273 242 aa17.63■□□□□ 0.41
LIMS1-211ENST00000462817 STAT5BP51692 787 aa17.63■□□□□ 0.41
LIMS1-211ENST00000462817 SETQ01105 290 aaPredicted RBP17.63■□□□□ 0.41
LIMS1-211ENST00000462817 ITGB3BPQ13352 177 aaPredicted RBP17.63■□□□□ 0.41
LIMS1-211ENST00000462817 ZNF577Q9BSK1 485 aa17.63■□□□□ 0.41
LIMS1-211ENST00000462817 YBX2Q9Y2T7 364 aaKnown RBP17.63■□□□□ 0.41
LIMS1-211ENST00000462817 ABHD14A-ACY1A0A1B0GW23 586 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 RRN3P2A6NIE6 340 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 IPO5O00410 1097 aaKnown RBP17.62■□□□□ 0.41
LIMS1-211ENST00000462817 MYOGP15173 224 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 XBP1P17861 261 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 GRIK4Q16099 956 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 PRR16Q569H4 304 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 FAM160B1Q5W0V3 765 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 TAF2Q6P1X5 1199 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 HERC6Q8IVU3 1022 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 MAFAQ8NHW3 353 aaPredicted RBP17.62■□□□□ 0.41
LIMS1-211ENST00000462817 UIMC1Q96RL1 719 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 C22orf23Q9BZE7 217 aa17.62■□□□□ 0.41
LIMS1-211ENST00000462817 PRDM12Q9H4Q4 367 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms