RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 MTMR1Q13613 665 aa17.65■□□□□ 0.42
SKA3-204ENST00000462482 TIGD5Q53EQ6 642 aa17.65■□□□□ 0.42
SKA3-204ENST00000462482 HEATR3Q7Z4Q2 680 aa17.65■□□□□ 0.42
SKA3-204ENST00000462482 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
SKA3-204ENST00000462482 SP7Q8TDD2 431 aaPredicted RBP17.65■□□□□ 0.42
SKA3-204ENST00000462482 MRPL38Q96DV4 380 aaKnown RBP17.65■□□□□ 0.42
SKA3-204ENST00000462482 UBE2ZQ9H832 354 aaPredicted RBP17.65■□□□□ 0.42
SKA3-204ENST00000462482 EPC2Q52LR7 807 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 FAM26DQ5JW98 314 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 CMTR1Q8N1G2 835 aaKnown RBP17.64■□□□□ 0.41
SKA3-204ENST00000462482 FANCBQ8NB91 859 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 IL17RAQ96F46 866 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 ESYT1Q9BSJ8 1104 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 LSG1Q9H089 658 aaKnown RBP17.64■□□□□ 0.41
SKA3-204ENST00000462482 SMARCAD1Q9H4L7 1026 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 AZI2Q9H6S1 392 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 PKD2L1Q9P0L9 805 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 MYO9BQ13459 2157 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 KIAA1217Q5T5P2 1943 aa17.64■□□□□ 0.41
SKA3-204ENST00000462482 KCNA2P16389 499 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 MARK3P27448 753 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
SKA3-204ENST00000462482 GPM6BQ13491 265 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 GRIK4Q16099 956 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 UBE2SQ16763 222 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 TMTC3Q6ZXV5 915 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 RPAINQ86UA6 219 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 MICU3Q86XE3 530 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 TMEM192Q8IY95 271 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 FIBCD1Q8N539 461 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 RBM28Q9NW13 759 aaKnown RBP17.63■□□□□ 0.41
SKA3-204ENST00000462482 TUBE1Q9UJT0 475 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 PCDHA6Q9UN73 950 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 PCDHA8Q9Y5H6 950 aa17.63■□□□□ 0.41
SKA3-204ENST00000462482 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.62■□□□□ 0.41
SKA3-204ENST00000462482 hCG_1642624A0A1W2PR95 340 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 RRN3P2A6NIE6 340 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 ATP9AO75110 1047 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 GHRP10912 638 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 ITGB5P18084 799 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 KCNA5P22460 613 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 ADAM17P78536 824 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 PUS10Q3MIT2 529 aaKnown RBP17.62■□□□□ 0.41
SKA3-204ENST00000462482 RAB11FIP4Q86YS3 637 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 TEX2Q8IWB9 1127 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 SDF4Q9BRK5 362 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 JADE2Q9NQC1 790 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 RWDD3Q9Y3V2 267 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 UBIAD1Q9Y5Z9 338 aa17.62■□□□□ 0.41
SKA3-204ENST00000462482 CHD7Q9P2D1 2997 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.61■□□□□ 0.41
SKA3-204ENST00000462482 H3BNC9 293 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 M0QZ92 97 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 NAPAP54920 295 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 LEXMQ3ZCV2 418 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 EP400NLQ6ZTU2 488 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 BANK1Q8NDB2 785 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 LRRC2Q9BYS8 371 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 JPH1Q9HDC5 661 aaPredicted RBP17.61■□□□□ 0.41
SKA3-204ENST00000462482 SLC9A2Q9UBY0 812 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 FAM50BQ9Y247 325 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 TELO2Q9Y4R8 837 aa17.61■□□□□ 0.41
SKA3-204ENST00000462482 PRRC2BQ5JSZ5 2229 aaKnown RBP17.61■□□□□ 0.41
SKA3-204ENST00000462482 GSTTP1A0A1W2PQM5 241 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 FOSP01100 380 aaPredicted RBP17.6■□□□□ 0.41
SKA3-204ENST00000462482 CHRNA1P02708 482 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 CTNNB1P35222 781 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 IGBP1P78318 339 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 NECTIN1Q15223 517 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 IER5Q5VY09 327 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 RUFY4Q6ZNE9 571 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 SGMS1Q86VZ5 419 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 DNAJB3Q8WWF6 145 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 NEK1Q96PY6 1258 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 GLT8D2Q9H1C3 349 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 TRPC6Q9Y210 931 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 MYH6P13533 1939 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 TET1Q8NFU7 2136 aa17.6■□□□□ 0.41
SKA3-204ENST00000462482 hCG_1984214I3L0E3 225 aa17.59■□□□□ 0.41
SKA3-204ENST00000462482 RB1P06400 928 aa17.59■□□□□ 0.41
SKA3-204ENST00000462482 TMEM31Q5JXX7 168 aa17.59■□□□□ 0.41
SKA3-204ENST00000462482 PPP1R18Q6NYC8 613 aa17.59■□□□□ 0.41
SKA3-204ENST00000462482 ZNF713Q8N859 430 aaPredicted RBP17.59■□□□□ 0.41
SKA3-204ENST00000462482 MXRA8Q9BRK3 442 aa17.59■□□□□ 0.41
SKA3-204ENST00000462482 C11orf84Q9BUA3 381 aaPredicted RBP17.59■□□□□ 0.41
SKA3-204ENST00000462482 OSBPL7Q9BZF2 842 aa17.59■□□□□ 0.41
SKA3-204ENST00000462482 FAM49AQ9H0Q0 323 aaPredicted RBP17.59■□□□□ 0.41
SKA3-204ENST00000462482 NSUN3Q9H649 340 aaKnown RBP17.59■□□□□ 0.41
SKA3-204ENST00000462482 CDY2AQ9Y6F7 541 aa17.59■□□□□ 0.41
SKA3-204ENST00000462482 MBLAC1A4D2B0 266 aaPredicted RBP17.58■□□□□ 0.4
SKA3-204ENST00000462482 ZBTB43O43298 467 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 NCK2O43639 380 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 SSTR3P32745 418 aaPredicted RBP17.58■□□□□ 0.4
SKA3-204ENST00000462482 ZNF76P36508 570 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 ADCY7P51828 1080 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 MRPS6P82932 125 aaKnown RBP17.58■□□□□ 0.4
SKA3-204ENST00000462482 FGD1P98174 961 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 BTG3Q14201 252 aaPredicted RBP17.58■□□□□ 0.4
SKA3-204ENST00000462482 LPIN1Q14693 890 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms