RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 RASIP1Q5U651 963 aa21.5■■□□□ 1.03
SLC6A1-204ENST00000462473 GLG1Q92896 1179 aa21.5■■□□□ 1.03
SLC6A1-204ENST00000462473 ATP6V0A1Q93050 837 aa21.5■■□□□ 1.03
SLC6A1-204ENST00000462473 FTOQ9C0B1 505 aaKnown RBP eCLIP21.5■■□□□ 1.03
SLC6A1-204ENST00000462473 PCDHA4Q9UN74 947 aa21.5■■□□□ 1.03
SLC6A1-204ENST00000462473 DOCK5Q9H7D0 1870 aa21.49■■□□□ 1.03
SLC6A1-204ENST00000462473 GNAT1P11488 350 aa21.49■■□□□ 1.03
SLC6A1-204ENST00000462473 ITGB3BPQ13352 177 aaPredicted RBP21.49■■□□□ 1.03
SLC6A1-204ENST00000462473 ZNF697Q5TEC3 545 aa21.49■■□□□ 1.03
SLC6A1-204ENST00000462473 FAM109BQ6ICB4 259 aaPredicted RBP21.49■■□□□ 1.03
SLC6A1-204ENST00000462473 AIFM3Q96NN9 605 aa21.49■■□□□ 1.03
SLC6A1-204ENST00000462473 SMARCAD1Q9H4L7 1026 aa21.49■■□□□ 1.03
SLC6A1-204ENST00000462473 SETD4Q9NVD3 440 aa21.49■■□□□ 1.03
SLC6A1-204ENST00000462473 ZBBXA8MT70 800 aa21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 DDX39AO00148 427 aaKnown RBP21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 CKBP12277 381 aa21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 SETQ01105 290 aaPredicted RBP21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 RBL2Q08999 1139 aa21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 ME3Q16798 604 aa21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 LRRC8DQ7L1W4 858 aa21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 FAM177A1Q8N128 213 aaPredicted RBP21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 VWCEQ96DN2 955 aa21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 C22orf23Q9BZE7 217 aa21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 AZI2Q9H6S1 392 aa21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 ERAP1Q9NZ08 941 aa21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 CXXC1Q9P0U4 656 aaPredicted RBP21.48■■□□□ 1.03
SLC6A1-204ENST00000462473 IGLV3-22A0A075B6J6 115 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 TREHO43280 583 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 PARNO95453 639 aaKnown RBP21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 ACTN1P12814 892 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 XBP1P17861 261 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 MARK3P27448 753 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 HOXC8P31273 242 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 ACTR2P61160 394 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 PRR16Q569H4 304 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 GALNT17Q6IS24 598 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 SERINC5Q86VE9 423 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 BLIDQ8IZY5 108 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 NECAB1Q8N987 351 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 WNT8BQ93098 351 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 ZNF577Q9BSK1 485 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 STK36Q9NRP7 1315 aa21.47■■□□□ 1.03
SLC6A1-204ENST00000462473 IPO5O00410 1097 aaKnown RBP21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 CIITAP33076 1130 aa21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 THPOP40225 353 aa21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 TRIM71Q2Q1W2 868 aaKnown RBP21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 ZNF618Q5T7W0 954 aa21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 DAGLBQ8NCG7 672 aa21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 FAM161BQ96MY7 647 aa21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 UIMC1Q96RL1 719 aa21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 MTMR10Q9NXD2 777 aa21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 SLC4A7Q9Y6M7 1214 aa21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 EMSYQ7Z589 1322 aa21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 NRCAMQ92823 1304 aa21.46■■□□□ 1.03
SLC6A1-204ENST00000462473 LAMA3Q16787 3333 aa21.45■■□□□ 1.03
SLC6A1-204ENST00000462473 GRXCR1A8MXD5 290 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 DTNBO60941 627 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 LGR5O75473 907 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 LARGE1O95461 756 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 CTDNEP1O95476 244 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 USP11P51784 963 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 PPFIA1Q13136 1202 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 TBCKQ8TEA7 893 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 LMBR1Q8WVP7 490 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 WASF1Q92558 559 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 GTF3C6Q969F1 213 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 PCYT2Q99447 389 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 TBC1D22BQ9NU19 505 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 ORC3Q9UBD5 711 aaPredicted RBP21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 KCNJ14Q9UNX9 436 aa21.45■■□□□ 1.02
SLC6A1-204ENST00000462473 ATG7O95352 703 aa21.44■■□□□ 1.02
SLC6A1-204ENST00000462473 STAT5BP51692 787 aa21.44■■□□□ 1.02
SLC6A1-204ENST00000462473 TNPO1Q92973 898 aaKnown RBP21.44■■□□□ 1.02
SLC6A1-204ENST00000462473 TRIP12Q14669 1992 aaPredicted RBP21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 RSPH10B2B2RC85 870 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 BACH1O14867 736 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 DHX15O43143 795 aaKnown RBP21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 CCNE2O96020 404 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 RSPH10BP0C881 870 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 DNAJB2P25686 324 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 GPNMBQ14956 572 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 GRIK4Q16099 956 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 PLPPR4Q7Z2D5 763 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 PHF20Q9BVI0 1012 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 PBX4Q9BYU1 374 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 SEMA6BQ9H3T3 888 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 TCEAL9Q9UHQ7 104 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 TRPC6Q9Y210 931 aa21.43■■□□□ 1.02
SLC6A1-204ENST00000462473 TMEM265A0A087WTH1 108 aa21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 M0R2N6 131 aa21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 NBNO60934 754 aa21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 ADAM17P78536 824 aa21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 SCN5AQ14524 2016 aa21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 NONOQ15233 471 aaKnown RBP eCLIP21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 NPY5RQ15761 445 aa21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 MIS18BP1Q6P0N0 1132 aa21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 TRAF7Q6Q0C0 670 aa21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 ABHD15Q6UXT9 468 aa21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 TIFAQ96CG3 184 aa21.42■■□□□ 1.02
SLC6A1-204ENST00000462473 MSRAQ9UJ68 235 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms