RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ZNF746Q6NUN9 644 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-221ENST00000462352 B3GNT9Q6UX72 402 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 NECAB2Q7Z6G3 386 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 C4orf32Q8N8J7 132 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 FERMT2Q96AC1 680 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 GLT1D1Q96MS3 346 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 MTMR9Q96QG7 549 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 SENP6Q9GZR1 1112 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-221ENST00000462352 UNC45AQ9H3U1 944 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 C11orf49Q9H6J7 331 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 TCEAL9Q9UHQ7 104 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 ZDHHC9Q9Y397 364 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 CHMP2AO43633 222 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 CABYRO75952 493 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 ATG7O95352 703 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 LGALS2P05162 132 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 OR52Z1P0C646 297 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 ZNF286BP0CG31 522 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 DDIT3P35638 169 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 TXKP42681 527 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 PTGDRQ13258 359 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 UTP14CQ5TAP6 766 aaKnown RBP13.31□□□□□ -0.28
CPNE1-221ENST00000462352 ABHD15Q6UXT9 468 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 KAT2BQ92831 832 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 C16orf70Q9BSU1 422 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 MTG1Q9BT17 334 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-221ENST00000462352 STARD7Q9NQZ5 370 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 VAV3Q9UKW4 847 aa13.31□□□□□ -0.28
CPNE1-221ENST00000462352 WDR64B1ANS9 1081 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 SUPT20HL2P0C7V6 817 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 JAK3P52333 1124 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 PPP2R5CQ13362 524 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 SF3A1Q15459 793 aaKnown RBP13.3□□□□□ -0.28
CPNE1-221ENST00000462352 TRIM50Q86XT4 487 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 SMAP1Q8IYB5 467 aaPredicted RBP13.3□□□□□ -0.28
CPNE1-221ENST00000462352 VTI1AQ96AJ9 217 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 PCYT2Q99447 389 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 TTC12Q9H892 705 aaPredicted RBP13.3□□□□□ -0.28
CPNE1-221ENST00000462352 DISC1Q9NRI5 854 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 PCDHA12Q9UN75 941 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 SAMM50Q9Y512 469 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 PCDHA10Q9Y5I2 948 aa13.3□□□□□ -0.28
CPNE1-221ENST00000462352 IGKV6D-21A0A0A0MT36 114 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 LAD1O00515 517 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 LGR5O75473 907 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 CAPN15O75808 1086 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 F2P00734 622 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 PSAPP07602 524 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 SFNP31947 248 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 ATN1P54259 1190 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-221ENST00000462352 PSMC6P62333 389 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 ATP2C1P98194 919 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-221ENST00000462352 SPIRE1Q08AE8 756 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 MIS18BP1Q6P0N0 1132 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 MIER3Q7Z3K6 550 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-221ENST00000462352 USP28Q96RU2 1077 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 FTOQ9C0B1 505 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPNE1-221ENST00000462352 AZI2Q9H6S1 392 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 CLIC4Q9Y696 253 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 EMSYQ7Z589 1322 aa13.29□□□□□ -0.28
CPNE1-221ENST00000462352 A0A0U1RQG5 324 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-221ENST00000462352 H3BRB1 525 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 HAS3O00219 553 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 EML1O00423 815 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 BACH1O14867 736 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 BMP15O95972 392 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 PRPHP41219 470 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 TECP42680 631 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 PSEN2P49810 448 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 STAT5BP51692 787 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 CHMP4BP1P59074 171 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 NUCB2P80303 420 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 CEBPZQ03701 1054 aaKnown RBP13.28□□□□□ -0.28
CPNE1-221ENST00000462352 MFSD10Q14728 455 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-221ENST00000462352 NCAPH2Q6IBW4 605 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 SWSAP1Q6NVH7 229 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-221ENST00000462352 SLC39A5Q6ZMH5 540 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 RDM1Q8NG50 284 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 AFAP1L1Q8TED9 768 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 GLG1Q92896 1179 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 ZNF396Q96N95 335 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-221ENST00000462352 KATNAL1Q9BW62 490 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 SMARCAD1Q9H4L7 1026 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 TUT1Q9H6E5 874 aaKnown RBP13.28□□□□□ -0.28
CPNE1-221ENST00000462352 ZNF302Q9NR11 478 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 ZNF215Q9UL58 517 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-221ENST00000462352 CEP131Q9UPN4 1083 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 GRIN2DO15399 1336 aa13.28□□□□□ -0.28
CPNE1-221ENST00000462352 SCN10AQ9Y5Y9 1956 aa13.27□□□□□ -0.28
CPNE1-221ENST00000462352 POTEMA6NI47 508 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 ARVCFO00192 962 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
CPNE1-221ENST00000462352 ITGA7Q13683 1181 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 SNX17Q15036 470 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 PTPAQ15257 358 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 EPHA7Q15375 998 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 IL17AQ16552 155 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms