RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 MXRA8Q9BRK3 442 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 AGXT2Q9BYV1 514 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 GLT8D2Q9H1C3 349 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 PKD2L1Q9P0L9 805 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 EMSYQ7Z589 1322 aa21.67■■□□□ 1.06
VARS-220ENST00000461874 ABHD14A-ACY1A0A1B0GW23 586 aa21.67■■□□□ 1.06
VARS-220ENST00000461874 KIF28PB7ZC32 967 aa21.67■■□□□ 1.06
VARS-220ENST00000461874 PSMA5P28066 241 aa21.67■■□□□ 1.06
VARS-220ENST00000461874 ADAM17P78536 824 aa21.67■■□□□ 1.06
VARS-220ENST00000461874 PFKFB3Q16875 520 aaPredicted RBP21.67■■□□□ 1.06
VARS-220ENST00000461874 CYP2W1Q8TAV3 490 aa21.67■■□□□ 1.06
VARS-220ENST00000461874 ANO3Q9BYT9 981 aa21.67■■□□□ 1.06
VARS-220ENST00000461874 KCNH7Q9NS40 1196 aa21.67■■□□□ 1.06
VARS-220ENST00000461874 NID2Q14112 1375 aa21.66■■□□□ 1.06
VARS-220ENST00000461874 EPB41L2O43491 1005 aaKnown RBP21.66■■□□□ 1.06
VARS-220ENST00000461874 EFCAB14O75071 495 aa21.66■■□□□ 1.06
VARS-220ENST00000461874 CAND2O75155 1236 aa21.66■■□□□ 1.06
VARS-220ENST00000461874 LGR5O75473 907 aa21.66■■□□□ 1.06
VARS-220ENST00000461874 CLK2P49760 499 aaKnown RBP21.66■■□□□ 1.06
VARS-220ENST00000461874 AP3B2Q13367 1082 aa21.66■■□□□ 1.06
VARS-220ENST00000461874 IKBKEQ14164 716 aa21.66■■□□□ 1.06
VARS-220ENST00000461874 LMBR1Q8WVP7 490 aa21.66■■□□□ 1.06
VARS-220ENST00000461874 TMEM260Q9NX78 707 aa21.66■■□□□ 1.06
VARS-220ENST00000461874 GBF1Q92538 1859 aa21.66■■□□□ 1.06
VARS-220ENST00000461874 DOCK5Q9H7D0 1870 aa21.65■■□□□ 1.06
VARS-220ENST00000461874 NRCAMQ92823 1304 aa21.65■■□□□ 1.06
VARS-220ENST00000461874 RBAK-RBAKDNI3L0D1 243 aa21.65■■□□□ 1.06
VARS-220ENST00000461874 SCG2P13521 617 aa21.65■■□□□ 1.06
VARS-220ENST00000461874 IGFBP4P22692 258 aa21.65■■□□□ 1.06
VARS-220ENST00000461874 DEFB103AP81534 67 aa21.65■■□□□ 1.06
VARS-220ENST00000461874 ARHGAP4P98171 946 aa21.65■■□□□ 1.06
VARS-220ENST00000461874 CEP55Q53EZ4 464 aa21.65■■□□□ 1.06
VARS-220ENST00000461874 JPH1Q9HDC5 661 aaPredicted RBP21.65■■□□□ 1.06
VARS-220ENST00000461874 PRPF3O43395 683 aaKnown RBP21.64■■□□□ 1.05
VARS-220ENST00000461874 TLL1O43897 1013 aa21.64■■□□□ 1.05
VARS-220ENST00000461874 ARHGEF15O94989 841 aa21.64■■□□□ 1.05
VARS-220ENST00000461874 SREBF1P36956 1147 aa21.64■■□□□ 1.05
VARS-220ENST00000461874 PKN1Q16512 942 aa21.64■■□□□ 1.05
VARS-220ENST00000461874 TMCO2Q7Z6W1 182 aaPredicted RBP21.64■■□□□ 1.05
VARS-220ENST00000461874 DBF4BQ8NFT6 615 aa21.64■■□□□ 1.05
VARS-220ENST00000461874 SMARCAD1Q9H4L7 1026 aa21.64■■□□□ 1.05
VARS-220ENST00000461874 ERAP1Q9NZ08 941 aa21.64■■□□□ 1.05
VARS-220ENST00000461874 NFASCO94856 1347 aa21.63■■□□□ 1.05
VARS-220ENST00000461874 ESYT2A0FGR8 921 aa21.63■■□□□ 1.05
VARS-220ENST00000461874 MEIS1O00470 390 aa21.63■■□□□ 1.05
VARS-220ENST00000461874 ARP10275 920 aa21.63■■□□□ 1.05
VARS-220ENST00000461874 EVCP57679 992 aa21.63■■□□□ 1.05
VARS-220ENST00000461874 TAP1Q03518 808 aa21.63■■□□□ 1.05
VARS-220ENST00000461874 PLEKHG4Q58EX7 1191 aa21.63■■□□□ 1.05
VARS-220ENST00000461874 PPM1EQ8WY54 764 aa21.63■■□□□ 1.05
VARS-220ENST00000461874 GLG1Q92896 1179 aa21.63■■□□□ 1.05
VARS-220ENST00000461874 COL25A1Q9BXS0 654 aaPredicted RBP21.63■■□□□ 1.05
VARS-220ENST00000461874 SLC9A2Q9UBY0 812 aa21.63■■□□□ 1.05
VARS-220ENST00000461874 VCANP13611 3396 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 GJB5O95377 273 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 CTSHP09668 335 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 MARK3P27448 753 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 PPFIA1Q13136 1202 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 MKRN4PQ13434 485 aaPredicted RBP21.62■■□□□ 1.05
VARS-220ENST00000461874 NTRK3Q16288 839 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 JAKMIP3Q5VZ66 844 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 RUFY3Q7L099 469 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 PCYT2Q99447 389 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 SDF4Q9BRK5 362 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 ZBED2Q9BTP6 218 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 ZMYND12Q9H0C1 365 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 CERS4Q9HA82 394 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 ZSWIM6Q9HCJ5 1215 aa21.62■■□□□ 1.05
VARS-220ENST00000461874 AGO4Q9HCK5 861 aaKnown RBP21.62■■□□□ 1.05
VARS-220ENST00000461874 PDIA3P30101 505 aaKnown RBP21.61■■□□□ 1.05
VARS-220ENST00000461874 ZNF76P36508 570 aa21.61■■□□□ 1.05
VARS-220ENST00000461874 ITGB3BPQ13352 177 aaPredicted RBP21.61■■□□□ 1.05
VARS-220ENST00000461874 FAM26DQ5JW98 314 aa21.61■■□□□ 1.05
VARS-220ENST00000461874 NIPA1Q7RTP0 329 aa21.61■■□□□ 1.05
VARS-220ENST00000461874 RPAINQ86UA6 219 aa21.61■■□□□ 1.05
VARS-220ENST00000461874 CCDC12Q8WUD4 166 aaPredicted RBP21.61■■□□□ 1.05
VARS-220ENST00000461874 CRYGNQ8WXF5 182 aa21.61■■□□□ 1.05
VARS-220ENST00000461874 PHKBQ93100 1093 aa21.61■■□□□ 1.05
VARS-220ENST00000461874 RAD9AQ99638 391 aa21.61■■□□□ 1.05
VARS-220ENST00000461874 OSBPL7Q9BZF2 842 aa21.61■■□□□ 1.05
VARS-220ENST00000461874 C6orf50Q9HD87 102 aa21.61■■□□□ 1.05
VARS-220ENST00000461874 LCHNA4D1U4 455 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 EPOPA6NHQ4 379 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 RFXAPO00287 272 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 ADAMTS3O15072 1205 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 ACTR2P61160 394 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 AKAP17AQ02040 695 aaKnown RBP21.6■■□□□ 1.05
VARS-220ENST00000461874 CCDC85BQ15834 202 aaPredicted RBP21.6■■□□□ 1.05
VARS-220ENST00000461874 GRIK4Q16099 956 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 MCTP2Q6DN12 878 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 TAF2Q6P1X5 1199 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.6■■□□□ 1.059e-7■■□□□ 12.5
VARS-220ENST00000461874 RUFY4Q6ZNE9 571 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 SEPT8Q92599 483 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 AZI2Q9H6S1 392 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 PRDM6Q9NQX0 595 aa21.6■■□□□ 1.05
VARS-220ENST00000461874 MBLAC1A4D2B0 266 aaPredicted RBP21.59■■□□□ 1.05
VARS-220ENST00000461874 CYP3A4P08684 503 aa21.59■■□□□ 1.05
VARS-220ENST00000461874 IFNAR1P17181 557 aa21.59■■□□□ 1.05
VARS-220ENST00000461874 POU3F3P20264 500 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms