RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 KCTD13Q8WZ19 329 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 LMF1Q96S06 567 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 ZNF341Q9BYN7 854 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 PRKAG3Q9UGI9 489 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 ZFP69BQ9UJL9 534 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 MSCO60682 206 aa6.86□□□□□ -1.31
CFHR3-204ENST00000461558 SSBP05455 408 aaKnown RBP eCLIP6.86□□□□□ -1.31
CFHR3-204ENST00000461558 FAHP16930 419 aa6.86□□□□□ -1.31
CFHR3-204ENST00000461558 PPP2R2AP63151 447 aa6.86□□□□□ -1.31
CFHR3-204ENST00000461558 FHL2Q14192 279 aa6.86□□□□□ -1.31
CFHR3-204ENST00000461558 OTOP3Q7RTS5 596 aa6.86□□□□□ -1.31
CFHR3-204ENST00000461558 RBM12BQ8IXT5 1001 aaKnown RBP6.86□□□□□ -1.31
CFHR3-204ENST00000461558 IFNL2Q8IZJ0 200 aa6.86□□□□□ -1.31
CFHR3-204ENST00000461558 LRRC37BQ96QE4 947 aa6.86□□□□□ -1.31
CFHR3-204ENST00000461558 EPN3Q9H201 632 aa6.86□□□□□ -1.31
CFHR3-204ENST00000461558 KCND1Q9NSA2 647 aa6.86□□□□□ -1.31
CFHR3-204ENST00000461558 ZBTB7CA1YPR0 619 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 GLRBP48167 497 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 TUSC3Q13454 348 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 PRKD1Q15139 912 aaPredicted RBP6.85□□□□□ -1.31
CFHR3-204ENST00000461558 SLC10A6Q3KNW5 377 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 PAN2Q504Q3 1202 aaKnown RBP6.85□□□□□ -1.31
CFHR3-204ENST00000461558 EEPD1Q7L9B9 569 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 REXO1L1PQ8IX06 675 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 STPG3Q8N7X2 389 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 IER2Q9BTL4 223 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 PHF20Q9BVI0 1012 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 PDGFDQ9GZP0 370 aaPredicted RBP6.85□□□□□ -1.31
CFHR3-204ENST00000461558 KATNBL1Q9H079 304 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 ARHGAP20Q9P2F6 1191 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 C11orf21Q9P2W6 132 aa6.85□□□□□ -1.31
CFHR3-204ENST00000461558 AGRPO00253 132 aa6.84□□□□□ -1.31
CFHR3-204ENST00000461558 LTFP02788 710 aa6.84□□□□□ -1.31
CFHR3-204ENST00000461558 RSPO2Q6UXX9 243 aaPredicted RBP6.84□□□□□ -1.31
CFHR3-204ENST00000461558 USP53Q70EK8 1073 aa6.84□□□□□ -1.31
CFHR3-204ENST00000461558 GIMAP8Q8ND71 665 aaPredicted RBP6.84□□□□□ -1.31
CFHR3-204ENST00000461558 UHMK1Q8TAS1 419 aaKnown RBP6.84□□□□□ -1.31
CFHR3-204ENST00000461558 ADOQ96SZ5 270 aa6.84□□□□□ -1.31
CFHR3-204ENST00000461558 CAPN10Q9HC96 672 aa6.84□□□□□ -1.31
CFHR3-204ENST00000461558 KIAA1522Q9P206 1035 aaPredicted RBP6.84□□□□□ -1.31
CFHR3-204ENST00000461558 ZFR2Q9UPR6 939 aaKnown RBP6.84□□□□□ -1.31
CFHR3-204ENST00000461558 NPIPB8E9PQR5 432 aa6.83□□□□□ -1.32
CFHR3-204ENST00000461558 GJB6O95452 261 aa6.83□□□□□ -1.32
CFHR3-204ENST00000461558 PFKPQ01813 784 aa6.83□□□□□ -1.32
CFHR3-204ENST00000461558 FOXE3Q13461 319 aa6.83□□□□□ -1.32
CFHR3-204ENST00000461558 CD276Q5ZPR3 534 aa6.83□□□□□ -1.32
CFHR3-204ENST00000461558 RNF207Q6ZRF8 634 aa6.83□□□□□ -1.32
CFHR3-204ENST00000461558 TELO2Q9Y4R8 837 aa6.83□□□□□ -1.32
CFHR3-204ENST00000461558 NUB1Q9Y5A7 615 aa6.83□□□□□ -1.32
CFHR3-204ENST00000461558 A0A1W2PQU0 124 aa6.82□□□□□ -1.32
CFHR3-204ENST00000461558 H0Y858 1186 aa6.82□□□□□ -1.32
CFHR3-204ENST00000461558 DLX3O60479 287 aa6.82□□□□□ -1.32
CFHR3-204ENST00000461558 ENO2P09104 434 aaPredicted RBP6.82□□□□□ -1.32
CFHR3-204ENST00000461558 GRK2P25098 689 aa6.82□□□□□ -1.32
CFHR3-204ENST00000461558 GRK3P35626 688 aa6.82□□□□□ -1.32
CFHR3-204ENST00000461558 ETFBP38117 255 aa6.82□□□□□ -1.32
CFHR3-204ENST00000461558 USP10Q14694 798 aaKnown RBP6.82□□□□□ -1.32
CFHR3-204ENST00000461558 MIIPQ5JXC2 388 aa6.82□□□□□ -1.32
CFHR3-204ENST00000461558 TAX1BP1Q86VP1 789 aa6.82□□□□□ -1.32
CFHR3-204ENST00000461558 NEIL1Q96FI4 390 aaPredicted RBP6.82□□□□□ -1.32
CFHR3-204ENST00000461558 PTPN22Q9Y2R2 807 aa6.82□□□□□ -1.32
CFHR3-204ENST00000461558 ZNF839A8K0R7 811 aa6.81□□□□□ -1.32
CFHR3-204ENST00000461558 IL18BPO95998 194 aa6.81□□□□□ -1.32
CFHR3-204ENST00000461558 ZNF888P0CJ79 500 aaPredicted RBP6.81□□□□□ -1.32
CFHR3-204ENST00000461558 GNAT1P11488 350 aa6.81□□□□□ -1.32
CFHR3-204ENST00000461558 COL6A2P12110 1019 aa6.81□□□□□ -1.32
CFHR3-204ENST00000461558 SPIRE1Q08AE8 756 aa6.81□□□□□ -1.32
CFHR3-204ENST00000461558 SMN1Q16637 294 aaKnown RBP6.81□□□□□ -1.32
CFHR3-204ENST00000461558 KIZQ2M2Z5 673 aa6.81□□□□□ -1.32
CFHR3-204ENST00000461558 HABP4Q5JVS0 413 aaKnown RBP6.81□□□□□ -1.32
CFHR3-204ENST00000461558 LBX2Q6XYB7 198 aa6.81□□□□□ -1.32
CFHR3-204ENST00000461558 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.81□□□□□ -1.32
CFHR3-204ENST00000461558 VPS37DQ86XT2 251 aa6.81□□□□□ -1.32
CFHR3-204ENST00000461558 WDR33Q9C0J8 1336 aaKnown RBP6.8□□□□□ -1.32
CFHR3-204ENST00000461558 NKRFO15226 690 aaKnown RBP eCLIP6.8□□□□□ -1.32
CFHR3-204ENST00000461558 COMTP21964 271 aa6.8□□□□□ -1.32
CFHR3-204ENST00000461558 ZNF568Q3ZCX4 644 aa6.8□□□□□ -1.32
CFHR3-204ENST00000461558 NRN1LQ496H8 165 aa6.8□□□□□ -1.32
CFHR3-204ENST00000461558 EDAQ92838 391 aa6.8□□□□□ -1.32
CFHR3-204ENST00000461558 ZNF503Q96F45 646 aa6.8□□□□□ -1.32
CFHR3-204ENST00000461558 KCNJ15Q99712 375 aa6.8□□□□□ -1.32
CFHR3-204ENST00000461558 TGM1P22735 817 aa6.79□□□□□ -1.32
CFHR3-204ENST00000461558 EPHA5P54756 1037 aa6.79□□□□□ -1.32
CFHR3-204ENST00000461558 INHBEP58166 350 aa6.79□□□□□ -1.32
CFHR3-204ENST00000461558 RAC3P60763 192 aa6.79□□□□□ -1.32
CFHR3-204ENST00000461558 PURAQ00577 322 aaKnown RBP6.79□□□□□ -1.32
CFHR3-204ENST00000461558 KCNT2Q6UVM3 1135 aa6.79□□□□□ -1.32
CFHR3-204ENST00000461558 FUKQ8N0W3 1084 aa6.79□□□□□ -1.32
CFHR3-204ENST00000461558 DCAF4Q8WV16 495 aa6.79□□□□□ -1.32
CFHR3-204ENST00000461558 TACO1Q9BSH4 297 aaKnown RBP6.79□□□□□ -1.32
CFHR3-204ENST00000461558 CARD11Q9BXL7 1154 aa6.79□□□□□ -1.32
CFHR3-204ENST00000461558 DSEQ9UL01 958 aa6.79□□□□□ -1.32
CFHR3-204ENST00000461558 ABHD18Q0P651 414 aa6.78□□□□□ -1.32
CFHR3-204ENST00000461558 USP39Q53GS9 565 aaKnown RBP6.78□□□□□ -1.32
CFHR3-204ENST00000461558 AGBL4Q5VU57 503 aa6.78□□□□□ -1.32
CFHR3-204ENST00000461558 IGFL4Q6B9Z1 124 aa6.78□□□□□ -1.32
CFHR3-204ENST00000461558 KCTD1Q719H9 257 aa6.78□□□□□ -1.32
CFHR3-204ENST00000461558 ZFYVE21Q9BQ24 234 aa6.78□□□□□ -1.32
CFHR3-204ENST00000461558 ACOT7O00154 380 aa6.77□□□□□ -1.33
CFHR3-204ENST00000461558 RAD17O75943 681 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms