RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 SF3A1Q15459 793 aaKnown RBP12.73□□□□□ -0.37
SSBP1-202ENST00000461433 IL17AQ16552 155 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 ZNF746Q6NUN9 644 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-202ENST00000461433 ABHD15Q6UXT9 468 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 SLFN12Q8IYM2 578 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 PCSK9Q8NBP7 692 aaKnown RBP12.73□□□□□ -0.37
SSBP1-202ENST00000461433 USP28Q96RU2 1077 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 PCYT2Q99447 389 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 C16orf70Q9BSU1 422 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 TEKT3Q9BXF9 490 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 PHF24Q9UPV7 400 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 DNAH12Q6ZR08 3092 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 ELP1O95163 1332 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 TCHHQ07283 1943 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 SCN10AQ9Y5Y9 1956 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 IGKV6D-21A0A0A0MT36 114 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 EML1O00423 815 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 NOP56O00567 594 aaKnown RBP12.73□□□□□ -0.37
SSBP1-202ENST00000461433 BAG4O95429 457 aaKnown RBP12.73□□□□□ -0.37
SSBP1-202ENST00000461433 OR52Z1P0C646 297 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 TCF7P36402 384 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-202ENST00000461433 TXKP42681 527 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 KRT76Q01546 638 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 DGKDQ16760 1214 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 CXCL17Q6UXB2 119 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 SEPT1Q8WYJ6 367 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 KAT2BQ92831 832 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 TTC12Q9H892 705 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-202ENST00000461433 PCDHA12Q9UN75 941 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 A0A1W2PQ45 241 aaPredicted RBP12.72□□□□□ -0.37
SSBP1-202ENST00000461433 A0A1W2PQY0 241 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 MOXD2PA6NHM9 499 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 KBTBD13C9JR72 458 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 LAD1O00515 517 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 LGR5O75473 907 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 LGALS2P05162 132 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 MYL3P08590 195 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 PRPHP41219 470 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 NUCB2P80303 420 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 FOXD4L6Q3SYB3 417 aaPredicted RBP12.72□□□□□ -0.37
SSBP1-202ENST00000461433 BRDTQ58F21 947 aaPredicted RBP12.72□□□□□ -0.37
SSBP1-202ENST00000461433 FOXD4L3Q6VB84 417 aaPredicted RBP12.72□□□□□ -0.37
SSBP1-202ENST00000461433 PAWRQ96IZ0 340 aaKnown RBP12.72□□□□□ -0.37
SSBP1-202ENST00000461433 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 TFIP11Q9UBB9 837 aaKnown RBP12.72□□□□□ -0.37
SSBP1-202ENST00000461433 MKI67P46013 3256 aaKnown RBP12.72□□□□□ -0.37
SSBP1-202ENST00000461433 GRIN2DO15399 1336 aa12.72□□□□□ -0.37
SSBP1-202ENST00000461433 MYH9P35579 1960 aaKnown RBP12.71□□□□□ -0.37
SSBP1-202ENST00000461433 CHMP2AO43633 222 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 ZEB2O60315 1214 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 MARCH6O60337 910 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 KPNA6O60684 536 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 F2P00734 622 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 SUPT20HL2P0C7V6 817 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 ZNF286BP0CG31 522 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 NASPP49321 788 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-202ENST00000461433 CEBPZQ03701 1054 aaKnown RBP12.71□□□□□ -0.37
SSBP1-202ENST00000461433 DNM1Q05193 864 aaKnown RBP12.71□□□□□ -0.37
SSBP1-202ENST00000461433 TRIM50Q86XT4 487 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 SMAP1Q8IYB5 467 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-202ENST00000461433 FERMT2Q96AC1 680 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 DISC1Q9NRI5 854 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-202ENST00000461433 PCDHA10Q9Y5I2 948 aa12.71□□□□□ -0.37
SSBP1-202ENST00000461433 WDR64B1ANS9 1081 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 HAS3O00219 553 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 SFNP31947 248 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 TECP42680 631 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
SSBP1-202ENST00000461433 ARL6IP4Q66PJ3 421 aaKnown RBP12.7□□□□□ -0.38
SSBP1-202ENST00000461433 CCDC60Q8IWA6 550 aaPredicted RBP12.7□□□□□ -0.38
SSBP1-202ENST00000461433 ZNF396Q96N95 335 aaPredicted RBP12.7□□□□□ -0.38
SSBP1-202ENST00000461433 MTG1Q9BT17 334 aaPredicted RBP12.7□□□□□ -0.38
SSBP1-202ENST00000461433 SENP6Q9GZR1 1112 aaPredicted RBP12.7□□□□□ -0.38
SSBP1-202ENST00000461433 MORC2Q9Y6X9 1032 aaPredicted RBP12.7□□□□□ -0.38
SSBP1-202ENST00000461433 EMSYQ7Z589 1322 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 POTEMA6NI47 508 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 H3BRB1 525 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 CABYRO75952 493 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 BMP15O95972 392 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 ATP4AP20648 1035 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 JAK3P52333 1124 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 PSMC6P62333 389 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 SLC39A14Q15043 492 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 UTP14CQ5TAP6 766 aaKnown RBP12.7□□□□□ -0.38
SSBP1-202ENST00000461433 SWSAP1Q6NVH7 229 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 MIS18BP1Q6P0N0 1132 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 MIER3Q7Z3K6 550 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 IGSF22Q8N9C0 903 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 RDM1Q8NG50 284 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 AFAP1L1Q8TED9 768 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 TUT1Q9H6E5 874 aaKnown RBP12.7□□□□□ -0.38
SSBP1-202ENST00000461433 CEP131Q9UPN4 1083 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 SAMM50Q9Y512 469 aa12.7□□□□□ -0.38
SSBP1-202ENST00000461433 MAFBQ9Y5Q3 323 aaPredicted RBP12.7□□□□□ -0.38
SSBP1-202ENST00000461433 ALPK3Q96L96 1907 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 PSAPP07602 524 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 GRIN1Q05586 938 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms