RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 SREBF1P36956 1147 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 CLK2P49760 499 aaKnown RBP17.54■□□□□ 0.4
VARS-219ENST00000461328 ARHGAP4P98171 946 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 SCRN1Q12765 414 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 HIC1Q14526 733 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 C8orf34Q49A92 452 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 MCTP2Q6DN12 878 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 SLC17A8Q8NDX2 589 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 MYLIPQ8WY64 445 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 ATP6V0A1Q93050 837 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 MXRA8Q9BRK3 442 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 TELO2Q9Y4R8 837 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 PARNO95453 639 aaKnown RBP17.53■□□□□ 0.4
VARS-219ENST00000461328 ATP2A2P16615 1042 aaKnown RBP17.53■□□□□ 0.4
VARS-219ENST00000461328 TCF7P36402 384 aaPredicted RBP17.53■□□□□ 0.4
VARS-219ENST00000461328 CEP55Q53EZ4 464 aa17.53■□□□□ 0.4
VARS-219ENST00000461328 RASGRP4Q8TDF6 673 aa17.53■□□□□ 0.4
VARS-219ENST00000461328 WNT8BQ93098 351 aa17.53■□□□□ 0.4
VARS-219ENST00000461328 SH3GLB2Q9NR46 395 aa17.53■□□□□ 0.4
VARS-219ENST00000461328 PFKFB2O60825 505 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 GNAT1P11488 350 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 FOSL2P15408 326 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 RABGGTBP53611 331 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 GRIN2CQ14957 1233 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 TRIM71Q2Q1W2 868 aaKnown RBP17.52■□□□□ 0.4
VARS-219ENST00000461328 SERINC5Q86VE9 423 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 SEPT1Q8WYJ6 367 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 IL17RAQ96F46 866 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 SDF4Q9BRK5 362 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 NKX2-4Q9H2Z4 354 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 KCNH7Q9NS40 1196 aa17.52■□□□□ 0.4
VARS-219ENST00000461328 COL6A3P12111 3177 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 TREHO43280 583 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 BAIAP3O94812 1187 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 HOXC8P31273 242 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 THPOP40225 353 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 ZNF618Q5T7W0 954 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 CYP2W1Q8TAV3 490 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 SLC9A7Q96T83 725 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 RNPEPQ9H4A4 650 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 SLC28A3Q9HAS3 691 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 JPH1Q9HDC5 661 aaPredicted RBP17.51■□□□□ 0.39
VARS-219ENST00000461328 SETD4Q9NVD3 440 aa17.51■□□□□ 0.39
VARS-219ENST00000461328 YBX2Q9Y2T7 364 aaKnown RBP17.51■□□□□ 0.39
VARS-219ENST00000461328 TRIP12Q14669 1992 aaPredicted RBP17.51■□□□□ 0.39
VARS-219ENST00000461328 STK36Q9NRP7 1315 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 GSTTP1A0A1W2PQM5 241 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 ADAMTS3O15072 1205 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 NBNO60934 754 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 XBP1P17861 261 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 MARK3P27448 753 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 KCNJ6P48051 423 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 GPNMBQ14956 572 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 CNKSR3Q6P9H4 555 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 PLA2G4DQ86XP0 818 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 NECAB1Q8N987 351 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 GLG1Q92896 1179 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 AIFM3Q96NN9 605 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 ERAP1Q9NZ08 941 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 SLC9A2Q9UBY0 812 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
VARS-219ENST00000461328 RSPH10B2B2RC85 870 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 CXCL10P02778 98 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 RSPH10BP0C881 870 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 ARP10275 920 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 MYOGP15173 224 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 PPP2R2DQ66LE6 453 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 TRAF7Q6Q0C0 670 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 MAFAQ8NHW3 353 aaPredicted RBP17.49■□□□□ 0.39
VARS-219ENST00000461328 PHOSPHO2Q8TCD6 241 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 GTF3C6Q969F1 213 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 SMARCAD1Q9H4L7 1026 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
VARS-219ENST00000461328 AGO4Q9HCK5 861 aaKnown RBP17.49■□□□□ 0.39
VARS-219ENST00000461328 TCEAL9Q9UHQ7 104 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 PCDHA4Q9UN74 947 aa17.49■□□□□ 0.39
VARS-219ENST00000461328 NFASCO94856 1347 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 EMSYQ7Z589 1322 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 NRCAMQ92823 1304 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 DDX39AO00148 427 aaKnown RBP17.48■□□□□ 0.39
VARS-219ENST00000461328 MEIS1O00470 390 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 DTNBO60941 627 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 LARGE1O95461 756 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 SETQ01105 290 aaPredicted RBP17.48■□□□□ 0.39
VARS-219ENST00000461328 ME3Q16798 604 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 NIPA1Q7RTP0 329 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 LMBR1Q8WVP7 490 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 WASF1Q92558 559 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 GAS2L1Q99501 681 aaPredicted RBP17.48■□□□□ 0.39
VARS-219ENST00000461328 AZI2Q9H6S1 392 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 ORC3Q9UBD5 711 aaPredicted RBP17.48■□□□□ 0.39
VARS-219ENST00000461328 GBF1Q92538 1859 aa17.48■□□□□ 0.39
VARS-219ENST00000461328 ABHD14A-ACY1A0A1B0GW23 586 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 FAM86B1E9PN63 330 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 CAND2O75155 1236 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 CYP3A4P08684 503 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 CTSHP09668 335 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 FAM86B2P0C5J1 330 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 ACTR2P61160 394 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms