RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 PTPAQ15257 358 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 EAPPQ56P03 285 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-219ENST00000461159 KIAA1755Q5JYT7 1200 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 TOGARAM2Q6ZUX3 1019 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 MICALCLQ6ZW33 695 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 HEATR3Q7Z4Q2 680 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 METTL16Q86W50 562 aaKnown RBP9.37□□□□□ -0.91
HDAC9-219ENST00000461159 MFN1Q8IWA4 741 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 DIS3L2Q8IYB7 885 aaKnown RBP9.37□□□□□ -0.91
HDAC9-219ENST00000461159 TC2NQ8N9U0 490 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 MLKLQ8NB16 471 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 DHX58Q96C10 678 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 PIGSQ96S52 555 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 RNF26Q9BY78 433 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-219ENST00000461159 CABP5Q9NP86 173 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 ADAM21Q9UKJ8 722 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 KCNH3Q9ULD8 1083 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 PCDHA5Q9Y5H7 936 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 CEP350Q5VT06 3117 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 PALM3A6NDB9 673 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 ADM5C9JUS6 153 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 PDLIM1O00151 329 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 PRPF3O43395 683 aaKnown RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 MMP1P03956 469 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 POTEIP0CG38 1075 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 POTEJP0CG39 1038 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 RANBP1P43487 201 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 TOB1P50616 345 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 IKQ13123 557 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 MPP3Q13368 585 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 HDXQ7Z353 690 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 ARMC9Q7Z3E5 817 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 SRGAP1Q7Z6B7 1085 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 FAM83AQ86UY5 434 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 PARP9Q8IXQ6 854 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 HNRNPLLQ8WVV9 542 aaKnown RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 RSPH1Q8WYR4 309 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 KAT2BQ92831 832 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 CCDC17Q96LX7 622 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 SCLT1Q96NL6 688 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 KANSL2Q9H9L4 492 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 INTS13Q9NVM9 706 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 F5H6K3 240 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 MAP2K7O14733 419 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 AHCYL1O43865 530 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 ABL2P42684 1182 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 SLC1A4P43007 532 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 TNNI2P48788 182 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 ADKP55263 362 aaKnown RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 FMR1Q06787 632 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 KLRC3Q07444 240 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 TMEM179Q6ZVK1 233 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 KRI1Q8N9T8 703 aaKnown RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 ENOX1Q8TC92 643 aaKnown RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 WASF1Q92558 559 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 COA7Q96BR5 231 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 METTL14Q9HCE5 456 aaKnown RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 BATF3Q9NR55 127 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 RABL2AQ9UBK7 228 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 HERC5Q9UII4 1024 aaKnown RBP9.36□□□□□ -0.91
HDAC9-219ENST00000461159 ZBTB21Q9ULJ3 1066 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 MYH4Q9Y623 1939 aa9.36□□□□□ -0.91
HDAC9-219ENST00000461159 CREB3O43889 395 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 SCG2P13521 617 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 EIF4BP23588 611 aaKnown RBP9.35□□□□□ -0.91
HDAC9-219ENST00000461159 TNFAIP1Q13829 316 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 KARSQ15046 597 aaKnown RBP9.35□□□□□ -0.91
HDAC9-219ENST00000461159 KBTBD12Q3ZCT8 623 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 SLFN13Q68D06 897 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 TRIML1Q8N9V2 468 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 SPDYE1Q8NFV5 336 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-219ENST00000461159 CABS1Q96KC9 395 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 PANX2Q96RD6 677 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 MAP3K14Q99558 947 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 NAA15Q9BXJ9 866 aaKnown RBP9.35□□□□□ -0.91
HDAC9-219ENST00000461159 PHACTR1Q9C0D0 580 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 GBP3Q9H0R5 595 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 NFE2L3Q9Y4A8 694 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 SMCHD1A6NHR9 2005 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 USP17L10C9JJH3 530 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 AKR1B15C9JRZ8 316 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-219ENST00000461159 NDUFB10O96000 172 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 FESP07332 822 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 ZNF18P17022 549 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 CAP2P40123 477 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 MAGEA10P43363 369 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-219ENST00000461159 APLP1P51693 650 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 USP4Q13107 963 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 DPY19L2Q6NUT2 758 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 MOB2Q70IA6 237 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 TMEM110Q86TL2 294 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 SAPCD2Q86UD0 394 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 OR8K1Q8NGG5 319 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 CLIC6Q96NY7 704 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 DUSP9Q99956 384 aaKnown RBP9.35□□□□□ -0.91
HDAC9-219ENST00000461159 MAN1B1Q9UKM7 699 aa9.35□□□□□ -0.91
HDAC9-219ENST00000461159 GREB1LQ9C091 1923 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-219ENST00000461159 PHF20L1A8MW92 1017 aa9.34□□□□□ -0.91
HDAC9-219ENST00000461159 TUBBP07437 444 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms