RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 NOSTRINQ8IVI9 506 aa12.54□□□□□ -0.4
APTX-209ENST00000460940 VTI1AQ96AJ9 217 aa12.54□□□□□ -0.4
APTX-209ENST00000460940 PKD2L1Q9P0L9 805 aa12.54□□□□□ -0.4
APTX-209ENST00000460940 SLC9A2Q9UBY0 812 aa12.54□□□□□ -0.4
APTX-209ENST00000460940 DDX25Q9UHL0 483 aaKnown RBP12.54□□□□□ -0.4
APTX-209ENST00000460940 SORBS3O60504 671 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 U2AF2P26368 475 aaKnown RBP eCLIP12.53□□□□□ -0.49e-15■■■■■ 42.9
APTX-209ENST00000460940 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
APTX-209ENST00000460940 RTP1P59025 263 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 ORC2Q13416 577 aaPredicted RBP12.53□□□□□ -0.4
APTX-209ENST00000460940 EARS2Q5JPH6 523 aaKnown RBP12.53□□□□□ -0.4
APTX-209ENST00000460940 ANKRD33Q7Z3H0 272 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 SLC43A3Q8NBI5 491 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 TOX2Q96NM4 488 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 RIT2Q99578 217 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 SCN10AQ9Y5Y9 1956 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 ARVCFO00192 962 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 MSH4O15457 936 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 EVI5O60447 810 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 CCNT1O60563 726 aaKnown RBP12.53□□□□□ -0.4
APTX-209ENST00000460940 TRAPPC10P48553 1259 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 KRT76Q01546 638 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 PTPN11Q06124 597 aaPredicted RBP12.53□□□□□ -0.4
APTX-209ENST00000460940 ITGA7Q13683 1181 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 LARP1BQ659C4 914 aaKnown RBP12.53□□□□□ -0.4
APTX-209ENST00000460940 NFRKBQ6P4R8 1299 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 SEPT1Q8WYJ6 367 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 DPF3Q92784 378 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 SLC5A5Q92911 643 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 BCAS3Q9H6U6 928 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
APTX-209ENST00000460940 NR2E3Q9Y5X4 410 aa12.53□□□□□ -0.4
APTX-209ENST00000460940 EMSYQ7Z589 1322 aa12.52□□□□□ -0.4
APTX-209ENST00000460940 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 DYNC1I1O14576 645 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 TBX3O15119 743 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 DHX15O43143 795 aaKnown RBP12.52□□□□□ -0.41
APTX-209ENST00000460940 LGALS2P05162 132 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 ZNF286BP0CG31 522 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 CDK7P50613 346 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 SP4Q02446 784 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 TRIM60Q495X7 471 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 ZNF746Q6NUN9 644 aaPredicted RBP12.52□□□□□ -0.41
APTX-209ENST00000460940 ETNPPLQ8TBG4 499 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 KAT2BQ92831 832 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 FAM20AQ96MK3 541 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 NOL7Q9UMY1 257 aaKnown RBP12.52□□□□□ -0.41
APTX-209ENST00000460940 ATP11BQ9Y2G3 1177 aa12.52□□□□□ -0.41
APTX-209ENST00000460940 MKI67P46013 3256 aaKnown RBP12.51□□□□□ -0.41
APTX-209ENST00000460940 SLC37A4O43826 429 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 GAS7O60861 476 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 TCF7P36402 384 aaPredicted RBP12.51□□□□□ -0.41
APTX-209ENST00000460940 PSEN2P49810 448 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 ACTR2P61160 394 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 PSMC6P62333 389 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 DMTNQ08495 405 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 MFSD10Q14728 455 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 LRCH2Q5VUJ6 765 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 SESTD1Q86VW0 696 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 C16orf70Q9BSU1 422 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 TEKT3Q9BXF9 490 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 KCNMB3Q9NPA1 279 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 CEP290O15078 2479 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 ALPK3Q96L96 1907 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 GSTTP1A0A1W2PQM5 241 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 DCDC2CA8MYV0 355 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 HAS3O00219 553 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 TLR3O15455 904 aaKnown RBP12.51□□□□□ -0.41
APTX-209ENST00000460940 PQBP1O60828 265 aaKnown RBP12.51□□□□□ -0.41
APTX-209ENST00000460940 LGR5O75473 907 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 TLE2Q04725 743 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 NBPF20Q3BBV1 942 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 MCTP1Q6DN14 999 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 SLFN12Q8IYM2 578 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 C7orf61Q8IZ16 206 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 RDM1Q8NG50 284 aa12.51□□□□□ -0.41
APTX-209ENST00000460940 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
APTX-209ENST00000460940 GRIN2DO15399 1336 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 DOCK5Q9H7D0 1870 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 WDR64B1ANS9 1081 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 H3BRB1 525 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 DDX39AO00148 427 aaKnown RBP12.5□□□□□ -0.41
APTX-209ENST00000460940 ZNF500O60304 480 aaPredicted RBP12.5□□□□□ -0.41
APTX-209ENST00000460940 NEMFO60524 1076 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 PSMD10O75832 226 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 ATG7O95352 703 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 CCNE2O96020 404 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 MSNP26038 577 aaKnown RBP12.5□□□□□ -0.41
APTX-209ENST00000460940 SFNP31947 248 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 SLC26A2P50443 739 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 JAK3P52333 1124 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 MIS18BP1Q6P0N0 1132 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 SMARCAD1Q9H4L7 1026 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 TUT1Q9H6E5 874 aaKnown RBP12.5□□□□□ -0.41
APTX-209ENST00000460940 AZI2Q9H6S1 392 aa12.5□□□□□ -0.41
APTX-209ENST00000460940 BAG4O95429 457 aaKnown RBP12.49□□□□□ -0.41
APTX-209ENST00000460940 CLTBP09497 229 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms